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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2431 A_BomoMSG_c12707_g1_i1
327bp
FPKM:4.40 TPM:2.29
2432 A_BomoMSG_c12708_g1_i1
242bp
 transcription_initiation_protein_SPT3_homolog_[Bombyx_mori]
FPKM:12.86 TPM:6.69
2433 A_BomoMSG_c12710_g1_i1
248bp
FPKM:2.42 TPM:1.26
2434 A_BomoMSG_c12711_g1_i1
201bp
FPKM:5.44 TPM:2.83
2435 A_BomoMSG_c12712_g1_i1
418bp
FPKM:4.25 TPM:2.21
2436 A_BomoMSG_c12713_g1_i1
415bp
 hormone-sensitive_lipase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0019433 P triglyceride catabolic process
GO:0033878 F hormone-sensitive lipase activity
GO:0042134 F rRNA primary transcript binding
FPKM:2.04 TPM:1.06
2437 A_BomoMSG_c12714_g1_i1
466bp
FPKM:4.36 TPM:2.27
2438 A_BomoMSG_c12715_g1_i1
254bp
 zinc_finger_protein_184_[Bombyx_mori]
FPKM:4.00 TPM:2.08
2439 A_BomoMSG_c12716_g1_i1
537bp
 PREDICTED:_protein_lethal(2)denticleless-like_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0022008 P neurogenesis
GO:0051726 P regulation of cell cycle
FPKM:2.79 TPM:1.45
2440 A_BomoMSG_c12717_g1_i1
216bp
FPKM:2.62 TPM:1.36
2441 A_BomoMSG_c12718_g1_i1
229bp
 uncharacterized_protein_LOC105841344,_partial_[Bombyx_mori]
FPKM:2.97 TPM:1.54
2442 A_BomoMSG_c12719_g1_i1
330bp
FPKM:2.66 TPM:1.39
2443 A_BomoMSG_c12719_g2_i1
416bp
FPKM:3.83 TPM:1.99
2444 A_BomoMSG_c12720_g1_i1
499bp
FPKM:6.01 TPM:3.13
2445 A_BomoMSG_c12721_g1_i1
218bp
FPKM:2.55 TPM:1.33
2446 A_BomoMSG_c12721_g2_i1
216bp
FPKM:2.62 TPM:1.36
2447 A_BomoMSG_c12724_g1_i1
848bp
 ran-binding_protein_3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
GO:0046907 P intracellular transport
FPKM:19.73 TPM:10.27
2448 A_BomoMSG_c12725_g1_i1
627bp
 LOW_QUALITY_PROTEIN:_ubiquinone_biosynthesis_monooxygenase_COQ6,_mitochondrial_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0006744 P ubiquinone biosynthetic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016709 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0042995 C cell projection
GO:0044550 P secondary metabolite biosynthetic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
FPKM:4.14 TPM:2.16
2449 A_BomoMSG_c12726_g1_i1
221bp
FPKM:13.08 TPM:6.81
2450 A_BomoMSG_c12727_g1_i1
274bp
 PHD_finger_protein_rhinoceros_[Bombyx_mori]
FPKM:0.48 TPM:0.25
2451 A_BomoMSG_c12728_g1_i1
806bp
 phosphohistidine_phosphatase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007548 P sex differentiation
GO:0030154 P cell differentiation
FPKM:32.04 TPM:16.67
2452 A_BomoMSG_c12729_g1_i1
372bp
FPKM:5891.62 TPM:3064.93
2453 A_BomoMSG_c1272_g1_i1
882bp
 nuclear_factor_interleukin-3-regulated_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006955 P immune response
GO:0007507 P heart development
GO:0007623 P circadian rhythm
GO:0043565 F sequence-specific DNA binding
GO:0048511 P rhythmic process
GO:0061515 P myeloid cell development
FPKM:2.54 TPM:1.32
2454 A_BomoMSG_c12730_g1_i1
432bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Papilio_polytes]
FPKM:2.51 TPM:1.30
2455 A_BomoMSG_c12730_g1_i2
404bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Papilio_polytes]
FPKM:0.52 TPM:0.27
2456 A_BomoMSG_c12731_g1_i1
528bp
 uncharacterized_protein_LOC110381307_isoform_X2_[Helicoverpa_armigera]
FPKM:2.06 TPM:1.07
2457 A_BomoMSG_c12732_g1_i1
426bp
FPKM:3.04 TPM:1.58
2458 A_BomoMSG_c12733_g1_i1
404bp
FPKM:3.54 TPM:1.84
2459 A_BomoMSG_c12735_g1_i1
332bp
FPKM:1.65 TPM:0.86
2460 A_BomoMSG_c12736_g1_i1
412bp
FPKM:5.26 TPM:2.74
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