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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2491 A_BomoMSG_c12767_g1_i1
428bp
 tetratricopeptide_repeat_protein_39B_isoform_X2_[Bombyx_mori]
FPKM:1.94 TPM:1.01
2492 A_BomoMSG_c12768_g1_i1
475bp
 uncharacterized_protein_LOC101735710_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2493 A_BomoMSG_c12768_g1_i2
604bp
 uncharacterized_protein_LOC101735710_isoform_X2_[Bombyx_mori]
FPKM:1.98 TPM:1.03
2494 A_BomoMSG_c12769_g1_i1
614bp
 ESF1_homolog_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
FPKM:25.17 TPM:13.10
2495 A_BomoMSG_c12770_g1_i1
413bp
FPKM:3.19 TPM:1.66
2496 A_BomoMSG_c12771_g1_i1
245bp
FPKM:4.99 TPM:2.60
2497 A_BomoMSG_c12772_g1_i1
206bp
 nuclear_pore_complex_protein_Nup205_[Bombyx_mori]
FPKM:12.08 TPM:6.28
2498 A_BomoMSG_c12775_g1_i1
365bp
 patj_homolog_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007155 P cell adhesion
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043220 C Schmidt-Lanterman incisure
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
FPKM:2.23 TPM:1.16
2499 A_BomoMSG_c12776_g1_i1
263bp
FPKM:5.28 TPM:2.74
2500 A_BomoMSG_c12777_g1_i1
279bp
FPKM:6.95 TPM:3.62
2501 A_BomoMSG_c12779_g1_i1
503bp
FPKM:3.06 TPM:1.59
2502 A_BomoMSG_c12779_g1_i2
304bp
FPKM:0.00 TPM:0.00
2503 A_BomoMSG_c1277_g1_i1
243bp
 uncharacterized_protein_LOC105842184_[Bombyx_mori]
FPKM:1.27 TPM:0.66
2504 A_BomoMSG_c12780_g1_i1
408bp
FPKM:3.72 TPM:1.93
2505 A_BomoMSG_c12781_g1_i1
388bp
FPKM:3.53 TPM:1.83
2506 A_BomoMSG_c12782_g1_i1
254bp
FPKM:1.14 TPM:0.59
2507 A_BomoMSG_c12783_g1_i1
330bp
 hypothetical_protein,_partial_[Acinetobacter_baumannii]
FPKM:2.00 TPM:1.04
2508 A_BomoMSG_c12786_g1_i1
345bp
hypothetical_protein_CH29B_p069_(chloroplast)_[Chlorella_sp._ArM0029B]
FPKM:0.00 TPM:0.00
2509 A_BomoMSG_c12786_g1_i2
588bp
hypothetical_protein_A3J81_08975,_partial_[Nitrospirae_bacterium_RIFOXYB2_FULL_43_5]
FPKM:1.23 TPM:0.64
2510 A_BomoMSG_c12787_g1_i1
271bp
FPKM:3.95 TPM:2.05
2511 A_BomoMSG_c12788_g1_i1
339bp
 tubulin_beta_chain_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0008152 P metabolic process
FPKM:3.57 TPM:1.86
2512 A_BomoMSG_c12790_g1_i1
2107bp
 luciferin_4-monooxygenase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0008218 P bioluminescence
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0047077 F Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2762.22 TPM:1436.96
2513 A_BomoMSG_c12790_g2_i1
443bp
 luciferin_4-monooxygenase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
FPKM:2.45 TPM:1.28
2514 A_BomoMSG_c12791_g1_i1
374bp
FPKM:2.68 TPM:1.39
2515 A_BomoMSG_c12793_g1_i1
228bp
FPKM:18.01 TPM:9.37
2516 A_BomoMSG_c12794_g1_i1
360bp
FPKM:5.14 TPM:2.67
2517 A_BomoMSG_c12795_g1_i1
492bp
 NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_3_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022900 P electron transport chain
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:9.76 TPM:5.08
2518 A_BomoMSG_c12795_g1_i2
519bp
 NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_3_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022900 P electron transport chain
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:12.39 TPM:6.44
2519 A_BomoMSG_c12795_g1_i3
472bp
 NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_3_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022900 P electron transport chain
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:173.45 TPM:90.23
2520 A_BomoMSG_c12796_g1_i1
420bp
FPKM:5.55 TPM:2.89
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