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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2101 A_BomoMSG_c1231_g1_i1
337bp
 hypothetical_protein_2_-_silkworm_transposon_mag
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:1.92 TPM:1.00
2102 A_BomoMSG_c12320_g1_i1
286bp
FPKM:7.92 TPM:4.12
2103 A_BomoMSG_c12321_g1_i1
612bp
FPKM:2.72 TPM:1.42
2104 A_BomoMSG_c12322_g1_i1
210bp
 reverse_transcriptase,_partial_[Bombyx_mori]
FPKM:3.80 TPM:1.97
2105 A_BomoMSG_c12323_g1_i1
614bp
FPKM:1.94 TPM:1.01
2106 A_BomoMSG_c12325_g1_i1
735bp
 uncharacterized_protein_LOC101739729_[Bombyx_mori]
FPKM:4.61 TPM:2.40
2107 A_BomoMSG_c12326_g1_i1
238bp
 LIM_and_SH3_domain_protein_Lasp_[Bombyx_mori]
FPKM:2.68 TPM:1.40
2108 A_BomoMSG_c12327_g1_i1
327bp
FPKM:4.74 TPM:2.47
2109 A_BomoMSG_c12328_g1_i1
323bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:4.16 TPM:2.16
2110 A_BomoMSG_c1232_g1_i1
332bp
 LOW_QUALITY_PROTEIN:_epidermal_growth_factor_receptor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:2.96 TPM:1.54
2111 A_BomoMSG_c12330_g1_i1
421bp
FPKM:5.97 TPM:3.11
2112 A_BomoMSG_c12333_g1_i1
229bp
FPKM:8.16 TPM:4.24
2113 A_BomoMSG_c12334_g1_i1
623bp
FPKM:21.50 TPM:11.19
2114 A_BomoMSG_c12335_g1_i1
221bp
FPKM:4.91 TPM:2.55
2115 A_BomoMSG_c12336_g1_i1
837bp
 cullin-2_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
FPKM:5.06 TPM:2.63
2116 A_BomoMSG_c12336_g2_i1
487bp
 fungal_protease_inhibitor_F-like_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
FPKM:11355.11 TPM:5907.15
2117 A_BomoMSG_c12337_g1_i1
1492bp
 heat_shock_protein_hsp21.4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0009408 P response to heat
GO:0030018 C Z disc
GO:0030837 P negative regulation of actin filament polymerization
GO:0042802 F identical protein binding
GO:0043292 C contractile fiber
GO:0051016 P barbed-end actin filament capping
GO:0051693 P actin filament capping
FPKM:911.35 TPM:474.10
2118 A_BomoMSG_c12338_g1_i1
248bp
FPKM:3.63 TPM:1.89
2119 A_BomoMSG_c12339_g1_i1
1124bp
 disks_large_homolog_5_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0006461 P protein-containing complex assembly
GO:0007165 P signal transduction
GO:0008013 F beta-catenin binding
GO:0008092 F cytoskeletal protein binding
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0030159 F signaling receptor complex adaptor activity
GO:0030859 P polarized epithelial cell differentiation
GO:0030901 P midbrain development
GO:0035556 P intracellular signal transduction
GO:0042981 P regulation of apoptotic process
GO:0045176 P apical protein localization
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0071896 P protein localization to adherens junction
GO:0072205 P metanephric collecting duct development
FPKM:2.15 TPM:1.12
2120 A_BomoMSG_c1233_g1_i1
809bp
FPKM:2.54 TPM:1.32
2121 A_BomoMSG_c12340_g1_i1
2267bp
 nucleolar_protein_12_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:37.38 TPM:19.45
2122 A_BomoMSG_c12341_g1_i1
512bp
 trimeric_intracellular_cation_channel_type_B_[Helicoverpa_armigera]
GO:0005261 F cation channel activity
GO:0005267 F potassium channel activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015672 P inorganic cation transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0071805 P potassium ion transmembrane transport
FPKM:3.64 TPM:1.89
2123 A_BomoMSG_c12342_g1_i1
321bp
FPKM:6.66 TPM:3.46
2124 A_BomoMSG_c12343_g1_i1
1775bp
 ubiquitin_carboxyl-terminal_hydrolase_isozyme_L5_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
FPKM:34.67 TPM:18.03
2125 A_BomoMSG_c12344_g1_i1
476bp
FPKM:6.43 TPM:3.35
2126 A_BomoMSG_c12345_g1_i1
241bp
FPKM:7.15 TPM:3.72
2127 A_BomoMSG_c12347_g1_i1
976bp
 inositol-tetrakisphosphate_1-kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016853 F isomerase activity
GO:0032957 P inositol trisphosphate metabolic process
GO:0046872 F metal ion binding
GO:0047325 F inositol tetrakisphosphate 1-kinase activity
GO:0052725 F inositol-1,3,4-trisphosphate 6-kinase activity
GO:0052726 F inositol-1,3,4-trisphosphate 5-kinase activity
FPKM:4.49 TPM:2.34
2128 A_BomoMSG_c12349_g1_i1
457bp
 ATP-dependent_(S)-NAD(P)H-hydrate_dehydratase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0047453 F ATP-dependent NAD(P)H-hydrate dehydratase activity
GO:0052855 F ADP-dependent NAD(P)H-hydrate dehydratase activity
FPKM:5.28 TPM:2.74
2129 A_BomoMSG_c12349_g1_i2
390bp
 ATP-dependent_(S)-NAD(P)H-hydrate_dehydratase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0047453 F ATP-dependent NAD(P)H-hydrate dehydratase activity
GO:0052855 F ADP-dependent NAD(P)H-hydrate dehydratase activity
FPKM:0.74 TPM:0.39
2130 A_BomoMSG_c1234_g1_i1
245bp
 uncharacterized_protein_LOC105841398_isoform_X1_[Bombyx_mori]
FPKM:1.87 TPM:0.97
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