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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2041 A_BomoMSG_c12264_g1_i1
510bp
 THAP_domain-containing_protein_1-like_[Bombyx_mori]
FPKM:2.33 TPM:1.21
2042 A_BomoMSG_c12264_g1_i2
389bp
FPKM:4.77 TPM:2.48
2043 A_BomoMSG_c12266_g1_i1
271bp
FPKM:1.48 TPM:0.77
2044 A_BomoMSG_c12267_g1_i1
254bp
FPKM:8.01 TPM:4.16
2045 A_BomoMSG_c12268_g1_i1
543bp
FPKM:5.03 TPM:2.62
2046 A_BomoMSG_c12269_g1_i1
593bp
 microtubule-associated_serine/threonine-protein_kinase_3_isoform_X7_[Bombyx_mori]
FPKM:3.65 TPM:1.90
2047 A_BomoMSG_c12269_g1_i2
409bp
 microtubule-associated_serine/threonine-protein_kinase_3_isoform_X7_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2048 A_BomoMSG_c1226_g1_i1
742bp
 F-box_only_protein_32_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0014878 P response to electrical stimulus involved in regulation of muscle adaptation
GO:0014889 P muscle atrophy
GO:0014894 P response to denervation involved in regulation of muscle adaptation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
FPKM:3.95 TPM:2.05
2049 A_BomoMSG_c12270_g1_i1
440bp
 patj_homolog_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
FPKM:1.86 TPM:0.97
2050 A_BomoMSG_c12271_g1_i1
258bp
FPKM:0.00 TPM:0.00
2051 A_BomoMSG_c12271_g1_i2
435bp
FPKM:2.73 TPM:1.42
2052 A_BomoMSG_c12272_g1_i1
369bp
FPKM:1.64 TPM:0.85
2053 A_BomoMSG_c12273_g1_i1
441bp
 PREDICTED:_zinc_finger_protein_jing,_partial_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
2054 A_BomoMSG_c12273_g1_i2
507bp
 PREDICTED:_zinc_finger_protein_jing,_partial_[Plutella_xylostella]
FPKM:1.51 TPM:0.79
2055 A_BomoMSG_c12274_g1_i1
229bp
 2-aminoethanethiol_dioxygenase_[Helicoverpa_armigera]
FPKM:5.19 TPM:2.70
2056 A_BomoMSG_c12275_g1_i1
214bp
FPKM:4.48 TPM:2.33
2057 A_BomoMSG_c12277_g1_i1
402bp
FPKM:2.85 TPM:1.48
2058 A_BomoMSG_c12278_g1_i1
230bp
FPKM:1.47 TPM:0.76
2059 A_BomoMSG_c12279_g1_i1
646bp
 G_protein_alpha_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001664 F G protein-coupled receptor binding
GO:0003384 P apical constriction involved in gastrulation
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005834 C heterotrimeric G-protein complex
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway
GO:0007264 P small GTPase mediated signal transduction
GO:0007266 P Rho protein signal transduction
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007370 P ventral furrow formation
GO:0007374 P posterior midgut invagination
GO:0008152 P metabolic process
GO:0008360 P regulation of cell shape
GO:0010004 P gastrulation involving germ band extension
GO:0016476 P regulation of embryonic cell shape
GO:0019001 F guanyl nucleotide binding
GO:0031526 C brush border membrane
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0031752 F D5 dopamine receptor binding
GO:0046872 F metal ion binding
GO:0070252 P actin-mediated cell contraction
FPKM:2.17 TPM:1.13
2060 A_BomoMSG_c12280_g1_i1
381bp
 PREDICTED:_uncharacterized_protein_LOC108757418_[Trachymyrmex_cornetzi]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.78 TPM:0.40
2061 A_BomoMSG_c12281_g1_i1
290bp
 probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
FPKM:3.42 TPM:1.78
2062 A_BomoMSG_c12282_g1_i1
582bp
 PREDICTED:_uncharacterized_protein_LOC105383896_[Plutella_xylostella]
FPKM:0.74 TPM:0.39
2063 A_BomoMSG_c12282_g1_i2
408bp
 PREDICTED:_uncharacterized_protein_LOC105389553_[Plutella_xylostella]
FPKM:1.31 TPM:0.68
2064 A_BomoMSG_c12284_g1_i1
356bp
 PREDICTED:_CAS1_domain-containing_protein_1_[Amyelois_transitella]
FPKM:3.78 TPM:1.97
2065 A_BomoMSG_c12285_g1_i1
516bp
 ribosomal_protein_L14_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:7.86 TPM:4.09
2066 A_BomoMSG_c12286_g1_i1
272bp
FPKM:0.00 TPM:0.00
2067 A_BomoMSG_c12286_g1_i2
482bp
FPKM:4.69 TPM:2.44
2068 A_BomoMSG_c12286_g1_i3
225bp
FPKM:0.00 TPM:0.00
2069 A_BomoMSG_c12287_g1_i1
320bp
 WD_repeat-containing_protein_81_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2070 A_BomoMSG_c12287_g1_i2
398bp
 WD_repeat-containing_protein_81_[Bombyx_mori]
FPKM:0.00 TPM:0.00
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