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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2011 A_BomoMSG_c12231_g1_i1
471bp
FPKM:4.67 TPM:2.43
2012 A_BomoMSG_c12233_g1_i1
271bp
FPKM:1.97 TPM:1.03
2013 A_BomoMSG_c12235_g1_i1
757bp
FPKM:1.97 TPM:1.03
2014 A_BomoMSG_c12236_g1_i1
265bp
FPKM:3.63 TPM:1.89
2015 A_BomoMSG_c12237_g1_i1
236bp
FPKM:2.06 TPM:1.07
2016 A_BomoMSG_c12238_g1_i1
367bp
FPKM:5.52 TPM:2.87
2017 A_BomoMSG_c12239_g1_i1
246bp
FPKM:0.62 TPM:0.32
2018 A_BomoMSG_c1223_g1_i1
395bp
FPKM:0.98 TPM:0.51
2019 A_BomoMSG_c12240_g1_i1
642bp
FPKM:1.83 TPM:0.95
2020 A_BomoMSG_c12241_g1_i1
567bp
 juvenile_hormone_esterase_1_precursor_[Bombyx_mori]
GO:0004453 F juvenile-hormone esterase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:3.88 TPM:2.02
2021 A_BomoMSG_c12242_g1_i1
801bp
 PEST_proteolytic_signal-containing_nuclear_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
FPKM:0.92 TPM:0.48
2022 A_BomoMSG_c12242_g1_i2
832bp
 PEST_proteolytic_signal-containing_nuclear_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
FPKM:16.98 TPM:8.83
2023 A_BomoMSG_c12242_g1_i3
820bp
 PEST_proteolytic_signal-containing_nuclear_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
FPKM:2.57 TPM:1.34
2024 A_BomoMSG_c12243_g1_i1
256bp
 EH_domain-binding_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
FPKM:1.68 TPM:0.88
2025 A_BomoMSG_c12243_g2_i1
254bp
FPKM:5.72 TPM:2.97
2026 A_BomoMSG_c12244_g1_i1
579bp
FPKM:22.76 TPM:11.84
2027 A_BomoMSG_c12246_g1_i1
871bp
 uncharacterized_protein_LOC101740855_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:1.74 TPM:0.91
2028 A_BomoMSG_c12248_g1_i1
293bp
FPKM:3.77 TPM:1.96
2029 A_BomoMSG_c12250_g1_i1
589bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.23 TPM:0.64
2030 A_BomoMSG_c12250_g2_i1
208bp
FPKM:2.93 TPM:1.52
2031 A_BomoMSG_c12252_g1_i1
202bp
FPKM:8.57 TPM:4.46
2032 A_BomoMSG_c12253_g1_i1
202bp
FPKM:7.49 TPM:3.90
2033 A_BomoMSG_c12254_g1_i1
562bp
FPKM:30.82 TPM:16.03
2034 A_BomoMSG_c12257_g1_i1
433bp
FPKM:4.66 TPM:2.42
2035 A_BomoMSG_c12258_g1_i1
335bp
FPKM:5.85 TPM:3.04
2036 A_BomoMSG_c12259_g1_i1
851bp
FPKM:18.79 TPM:9.78
2037 A_BomoMSG_c12260_g1_i1
513bp
 protein_cramped_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
FPKM:3.47 TPM:1.80
2038 A_BomoMSG_c12261_g1_i1
230bp
 HD_domain-containing_protein_2_isoform_X1_[Bombyx_mori]
FPKM:2.20 TPM:1.14
2039 A_BomoMSG_c12262_g1_i1
636bp
 uncharacterized_protein_LOC101743591_isoform_X2_[Bombyx_mori]
FPKM:5.04 TPM:2.62
2040 A_BomoMSG_c12263_g1_i1
242bp
FPKM:7.72 TPM:4.01
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