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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1771 A_BomoMSG_c11948_g1_i2
336bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.71 TPM:0.37
1772 A_BomoMSG_c11949_g1_i1
359bp
FPKM:2.87 TPM:1.49
1773 A_BomoMSG_c1194_g1_i1
473bp
 proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X1_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
FPKM:2.60 TPM:1.35
1774 A_BomoMSG_c1194_g1_i2
470bp
 proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X1_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
FPKM:0.00 TPM:0.00
1775 A_BomoMSG_c11951_g1_i1
297bp
 raf_kinase,_effector_of_Ras_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002168 P instar larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0007298 P border follicle cell migration
GO:0007362 P terminal region determination
GO:0007369 P gastrulation
GO:0007428 P primary branching, open tracheal system
GO:0007472 P wing disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007552 P metamorphosis
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008284 P positive regulation of cell population proliferation
GO:0008293 P torso signaling pathway
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0009267 P cellular response to starvation
GO:0016242 P negative regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030097 P hemopoiesis
GO:0030641 P regulation of cellular pH
GO:0035171 P lamellocyte differentiation
GO:0035309 P wing and notum subfield formation
GO:0035556 P intracellular signal transduction
GO:0040014 P regulation of multicellular organism growth
GO:0042386 P hemocyte differentiation
GO:0046534 P positive regulation of photoreceptor cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:2001234 P negative regulation of apoptotic signaling pathway
FPKM:5.30 TPM:2.76
1776 A_BomoMSG_c11953_g1_i1
354bp
 PREDICTED:_disco-interacting_protein_2_isoform_X1_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
FPKM:4.41 TPM:2.29
1777 A_BomoMSG_c11955_g1_i1
279bp
FPKM:5.10 TPM:2.65
1778 A_BomoMSG_c11957_g1_i1
435bp
FPKM:3.78 TPM:1.97
1779 A_BomoMSG_c11960_g1_i1
570bp
 glucose_dehydrogenase_[FAD,_quinone],_partial_[Bombyx_mori]
GO:0004344 F glucose dehydrogenase activity
GO:0005576 C extracellular region
GO:0006006 P glucose metabolic process
GO:0008364 P pupal chitin-based cuticle development
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0019233 P sensory perception of pain
GO:0042335 P cuticle development
GO:0046693 P sperm storage
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.28 TPM:1.71
1780 A_BomoMSG_c11961_g1_i1
356bp
 uncharacterized_protein_LOC101743310_isoform_X6_[Bombyx_mori]
FPKM:1.75 TPM:0.91
1781 A_BomoMSG_c11962_g1_i1
235bp
 uncharacterized_protein_LOC101746477_isoform_X1_[Bombyx_mori]
FPKM:2.08 TPM:1.08
1782 A_BomoMSG_c11963_g1_i1
253bp
FPKM:3.46 TPM:1.80
1783 A_BomoMSG_c11964_g1_i1
292bp
FPKM:3.37 TPM:1.75
1784 A_BomoMSG_c11965_g1_i1
474bp
 unknown_[Bombyx_mori]
FPKM:1.11 TPM:0.58
1785 A_BomoMSG_c11966_g1_i1
231bp
 hypothetical_protein_RR46_11832_[Papilio_xuthus]
FPKM:2.17 TPM:1.13
1786 A_BomoMSG_c11967_g1_i1
244bp
FPKM:5.67 TPM:2.95
1787 A_BomoMSG_c11968_g1_i1
205bp
 menin_[Bombyx_mori]
FPKM:3.07 TPM:1.59
1788 A_BomoMSG_c11969_g1_i1
370bp
 PREDICTED:_uncharacterized_protein_LOC105383056_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.18 TPM:1.13
1789 A_BomoMSG_c1196_g1_i1
244bp
 titin_isoform_X2_[Bombyx_mori]
FPKM:4.41 TPM:2.29
1790 A_BomoMSG_c11970_g1_i1
341bp
FPKM:3.45 TPM:1.80
1791 A_BomoMSG_c11972_g1_i1
699bp
 LOW_QUALITY_PROTEIN:_sugar_transporter_SWEET1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0007431 P salivary gland development
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034219 P carbohydrate transmembrane transport
GO:0051119 F sugar transmembrane transporter activity
FPKM:30.32 TPM:15.77
1792 A_BomoMSG_c11973_g1_i1
216bp
 uncharacterized_protein_LOC101735869_[Bombyx_mori]
FPKM:6.11 TPM:3.18
1793 A_BomoMSG_c11974_g1_i1
452bp
 PREDICTED:_uncharacterized_protein_LOC105389737_[Plutella_xylostella]
FPKM:4.17 TPM:2.17
1794 A_BomoMSG_c11978_g1_i1
336bp
FPKM:1.04 TPM:0.54
1795 A_BomoMSG_c11978_g1_i2
218bp
FPKM:1.50 TPM:0.78
1796 A_BomoMSG_c1197_g1_i1
803bp
 histone-lysine_N-methyltransferase_EHMT1-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0002039 F p53 binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018026 P peptidyl-lysine monomethylation
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0051567 P histone H3-K9 methylation
GO:0060992 P response to fungicide
GO:0070734 P histone H3-K27 methylation
GO:0070742 F C2H2 zinc finger domain binding
FPKM:38.84 TPM:20.21
1797 A_BomoMSG_c11980_g1_i1
420bp
 zwei_Ig_domain_protein_zig-8_[Bombyx_mori]
FPKM:3.11 TPM:1.62
1798 A_BomoMSG_c11983_g1_i1
258bp
FPKM:7.72 TPM:4.02
1799 A_BomoMSG_c11987_g1_i1
248bp
FPKM:2.02 TPM:1.05
1800 A_BomoMSG_c11987_g1_i2
478bp
FPKM:4.69 TPM:2.44
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