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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1711 A_BomoMSG_c11883_g1_i1
397bp
FPKM:4.13 TPM:2.15
1712 A_BomoMSG_c11885_g1_i1
299bp
 ubiquitin_carboxyl-terminal_hydrolase_32_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
FPKM:2.01 TPM:1.05
1713 A_BomoMSG_c11885_g2_i1
221bp
 ubiquitin_carboxyl-terminal_hydrolase_32_isoform_X2_[Bombyx_mori]
FPKM:4.09 TPM:2.13
1714 A_BomoMSG_c11886_g1_i1
256bp
FPKM:2.81 TPM:1.46
1715 A_BomoMSG_c11887_g1_i1
229bp
FPKM:12.61 TPM:6.56
1716 A_BomoMSG_c11887_g1_i2
230bp
FPKM:0.00 TPM:0.00
1717 A_BomoMSG_c11888_g1_i1
370bp
 protein_Jumonji_isoform_X2_[Bombyx_mori]
FPKM:2.18 TPM:1.13
1718 A_BomoMSG_c11890_g1_i1
277bp
FPKM:0.94 TPM:0.49
1719 A_BomoMSG_c11891_g1_i1
238bp
FPKM:1.34 TPM:0.70
1720 A_BomoMSG_c11892_g1_i1
288bp
 uncharacterized_protein_LOC101747195_[Bombyx_mori]
FPKM:7.81 TPM:4.06
1721 A_BomoMSG_c11894_g1_i1
351bp
 conserved_oligomeric_Golgi_complex_subunit_8_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
FPKM:9.54 TPM:4.96
1722 A_BomoMSG_c11895_g1_i1
237bp
FPKM:3.39 TPM:1.76
1723 A_BomoMSG_c11897_g1_i1
283bp
FPKM:3.60 TPM:1.87
1724 A_BomoMSG_c11898_g1_i1
283bp
 cyclin-dependent_kinase_20-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0042995 C cell projection
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0060271 P cilium assembly
FPKM:0.00 TPM:0.00
1725 A_BomoMSG_c11898_g1_i2
393bp
 cyclin-dependent_kinase_20-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0042995 C cell projection
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0060271 P cilium assembly
FPKM:0.49 TPM:0.26
1726 A_BomoMSG_c11899_g1_i1
311bp
 uncharacterized_protein_LOC101737693_[Bombyx_mori]
FPKM:3.35 TPM:1.74
1727 A_BomoMSG_c118_g1_i1
307bp
FPKM:4.20 TPM:2.18
1728 A_BomoMSG_c11900_g1_i1
576bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:2.11 TPM:1.10
1729 A_BomoMSG_c11900_g2_i1
204bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:3.11 TPM:1.62
1730 A_BomoMSG_c11901_g1_i1
266bp
FPKM:2.57 TPM:1.34
1731 A_BomoMSG_c11902_g1_i1
408bp
 uncharacterized_protein_LOC105841502_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
FPKM:2.32 TPM:1.21
1732 A_BomoMSG_c11905_g1_i1
293bp
FPKM:1.26 TPM:0.65
1733 A_BomoMSG_c11905_g2_i1
225bp
FPKM:0.78 TPM:0.40
1734 A_BomoMSG_c11906_g1_i1
262bp
FPKM:6.39 TPM:3.32
1735 A_BomoMSG_c1190_g1_i1
230bp
 Endonuclease-reverse_transcriptase,_partial_[Operophtera_brumata]
FPKM:2.20 TPM:1.14
1736 A_BomoMSG_c11910_g1_i1
271bp
FPKM:2.47 TPM:1.28
1737 A_BomoMSG_c11911_g1_i1
307bp
FPKM:1.53 TPM:0.79
1738 A_BomoMSG_c11912_g1_i1
209bp
hypothetical_protein,_partial_[uncultured_alpha_proteobacterium_HF0070_14E07]
FPKM:0.96 TPM:0.50
1739 A_BomoMSG_c11912_g2_i1
218bp
hypothetical_protein,_partial_[uncultured_alpha_proteobacterium_HF0070_14E07]
FPKM:4.25 TPM:2.21
1740 A_BomoMSG_c11914_g1_i1
247bp
FPKM:1.22 TPM:0.64
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