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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1681 A_BomoMSG_c11846_g1_i2
677bp
 uncharacterized_protein_LOC101737389_[Bombyx_mori]
FPKM:3.09 TPM:1.61
1682 A_BomoMSG_c11848_g1_i1
401bp
FPKM:1.19 TPM:0.62
1683 A_BomoMSG_c1184_g1_i1
495bp
 uncharacterized_protein_LOC101745986_isoform_X3_[Bombyx_mori]
FPKM:3.65 TPM:1.90
1684 A_BomoMSG_c11850_g1_i1
396bp
FPKM:3.17 TPM:1.65
1685 A_BomoMSG_c11851_g1_i1
280bp
FPKM:4.14 TPM:2.15
1686 A_BomoMSG_c11852_g1_i1
210bp
 elongation_factor_1_gamma_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0004364 F glutathione transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0005875 C microtubule associated complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006749 P glutathione metabolic process
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
FPKM:0.00 TPM:0.00
1687 A_BomoMSG_c11852_g1_i2
623bp
 elongation_factor_1_gamma_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:2.78 TPM:1.45
1688 A_BomoMSG_c11852_g1_i3
267bp
 elongation_factor_1_gamma_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:0.54 TPM:0.28
1689 A_BomoMSG_c11854_g1_i1
321bp
 hypothetical_protein_WH47_08647_[Habropoda_laboriosa]
FPKM:5.96 TPM:3.10
1690 A_BomoMSG_c11855_g1_i1
329bp
FPKM:2.01 TPM:1.05
1691 A_BomoMSG_c11856_g1_i1
403bp
DUF2076_domain-containing_protein_[Pseudomonas_sp._PE-S1G-1]
FPKM:1.42 TPM:0.74
1692 A_BomoMSG_c11857_g1_i1
237bp
 uncharacterized_protein_LOC101745053_[Bombyx_mori]
FPKM:1.36 TPM:0.71
1693 A_BomoMSG_c11858_g1_i1
295bp
 Retrovirus-related_Pol_polyprotein,_partial_[Operophtera_brumata]
FPKM:2.06 TPM:1.07
1694 A_BomoMSG_c11859_g1_i1
671bp
 protein_HID1_isoform_X2_[Bombyx_mori]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005881 C cytoplasmic microtubule
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
GO:0031001 P response to brefeldin A
GO:0070062 C extracellular exosome
GO:0090498 C extrinsic component of Golgi membrane
FPKM:2.87 TPM:1.50
1695 A_BomoMSG_c11860_g1_i1
277bp
FPKM:4.71 TPM:2.45
1696 A_BomoMSG_c11861_g1_i1
531bp
FPKM:3.14 TPM:1.64
1697 A_BomoMSG_c11862_g1_i1
303bp
 uncharacterized_protein_LOC101744711_isoform_X2_[Bombyx_mori]
FPKM:4.31 TPM:2.24
1698 A_BomoMSG_c11863_g1_i1
320bp
FPKM:3.53 TPM:1.83
1699 A_BomoMSG_c11865_g1_i1
267bp
 uncharacterized_protein_LOC101742950_[Bombyx_mori]
GO:0002165 P instar larval or pupal development
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0010369 C chromocenter
GO:0010385 F double-stranded methylated DNA binding
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035220 P wing disc development
GO:0040029 P regulation of gene expression, epigenetic
GO:0044026 P DNA hypermethylation
GO:0045814 P negative regulation of gene expression, epigenetic
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051038 P negative regulation of transcription involved in meiotic cell cycle
GO:0051567 P histone H3-K9 methylation
GO:0060968 P obsolete regulation of gene silencing
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
FPKM:3.06 TPM:1.59
1700 A_BomoMSG_c11867_g1_i1
249bp
FPKM:7.20 TPM:3.74
1701 A_BomoMSG_c1186_g1_i1
883bp
FPKM:1.96 TPM:1.02
1702 A_BomoMSG_c11870_g1_i1
345bp
FPKM:10.76 TPM:5.60
1703 A_BomoMSG_c11873_g1_i1
787bp
FPKM:4.42 TPM:2.30
1704 A_BomoMSG_c11874_g1_i1
319bp
FPKM:6.03 TPM:3.14
1705 A_BomoMSG_c11878_g1_i1
229bp
 uncharacterized_protein_LOC110385888_[Bombyx_mori]
FPKM:2.15 TPM:1.12
1706 A_BomoMSG_c11879_g1_i1
221bp
 uncharacterized_protein_LOC101740358_isoform_X3_[Bombyx_mori]
FPKM:8.99 TPM:4.68
1707 A_BomoMSG_c11879_g2_i1
559bp
 uncharacterized_protein_LOC101740358_isoform_X1_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0016020 C membrane
FPKM:1.46 TPM:0.76
1708 A_BomoMSG_c1187_g1_i1
260bp
FPKM:4.33 TPM:2.25
1709 A_BomoMSG_c11880_g1_i1
254bp
FPKM:3.43 TPM:1.78
1710 A_BomoMSG_c11882_g1_i1
232bp
 reverse_transcriptase,_partial_[Bombyx_mori]
FPKM:10.03 TPM:5.22
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