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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1621 A_BomoMSG_c11772_g1_i1
799bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:1.38 TPM:0.72
1622 A_BomoMSG_c11774_g1_i1
275bp
 hypothetical_protein_RR48_13886_[Papilio_machaon]
FPKM:3.35 TPM:1.74
1623 A_BomoMSG_c11776_g1_i1
623bp
 28S_ribosomal_protein_S24,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:32.67 TPM:17.00
1624 A_BomoMSG_c11777_g1_i1
773bp
FPKM:3.05 TPM:1.59
1625 A_BomoMSG_c11777_g1_i2
494bp
FPKM:0.22 TPM:0.11
1626 A_BomoMSG_c11783_g1_i1
261bp
 probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
FPKM:6.44 TPM:3.35
1627 A_BomoMSG_c11784_g1_i1
225bp
FPKM:2.33 TPM:1.21
1628 A_BomoMSG_c11784_g2_i1
236bp
FPKM:1.62 TPM:0.84
1629 A_BomoMSG_c11785_g1_i1
260bp
FPKM:4.87 TPM:2.54
1630 A_BomoMSG_c11787_g1_i1
218bp
FPKM:2.55 TPM:1.33
1631 A_BomoMSG_c11788_g1_i1
503bp
 centromere-associated_protein_E-like_isoform_X3_[Helicoverpa_armigera]
FPKM:3.06 TPM:1.59
1632 A_BomoMSG_c11791_g1_i1
470bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.09 TPM:1.61
1633 A_BomoMSG_c11791_g1_i2
405bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001764 P neuron migration
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:2000171 P negative regulation of dendrite development
FPKM:2.23 TPM:1.16
1634 A_BomoMSG_c11792_g1_i1
206bp
FPKM:3.02 TPM:1.57
1635 A_BomoMSG_c11793_g1_i1
233bp
 uncharacterized_protein_LOC105842745,_partial_[Bombyx_mori]
FPKM:2.83 TPM:1.47
1636 A_BomoMSG_c11795_g1_i1
383bp
FPKM:3.09 TPM:1.61
1637 A_BomoMSG_c11796_g1_i1
560bp
FPKM:3.36 TPM:1.75
1638 A_BomoMSG_c11797_g1_i1
297bp
FPKM:3.26 TPM:1.70
1639 A_BomoMSG_c11799_g1_i1
297bp
 hypothetical_protein_ALC60_11621,_partial_[Trachymyrmex_zeteki]
FPKM:5.70 TPM:2.97
1640 A_BomoMSG_c1179_g1_i1
520bp
FPKM:3.08 TPM:1.60
1641 A_BomoMSG_c11801_g1_i1
350bp
 TBC1_domain_family_member_24_isoform_X7_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
FPKM:1.80 TPM:0.94
1642 A_BomoMSG_c11804_g1_i1
343bp
 hypothetical_protein_RR48_09229_[Papilio_machaon]
FPKM:3.73 TPM:1.94
1643 A_BomoMSG_c11806_g1_i1
225bp
FPKM:3.89 TPM:2.02
1644 A_BomoMSG_c11807_g1_i1
278bp
FPKM:2.80 TPM:1.46
1645 A_BomoMSG_c11808_g1_i1
3493bp
 endoplasmic_reticulum_resident_protein_44_isoform_X2_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
GO:0009100 P glycoprotein metabolic process
GO:0009986 C cell surface
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
GO:0070062 C extracellular exosome
FPKM:38.74 TPM:20.15
1646 A_BomoMSG_c11809_g1_i1
1028bp
 achintya_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010470 P regulation of gastrulation
GO:0038092 P nodal signaling pathway
GO:0045666 P positive regulation of neuron differentiation
GO:0060041 P retina development in camera-type eye
FPKM:27.69 TPM:14.40
1647 A_BomoMSG_c1180_g1_i1
201bp
FPKM:1.09 TPM:0.57
1648 A_BomoMSG_c1180_g2_i1
298bp
FPKM:3.24 TPM:1.68
1649 A_BomoMSG_c11810_g1_i1
535bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X2_[Papilio_machaon]
FPKM:1.56 TPM:0.81
1650 A_BomoMSG_c11811_g1_i1
213bp
FPKM:7.28 TPM:3.78
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