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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1591 A_BomoMSG_c11743_g1_i1
409bp
FPKM:5.09 TPM:2.65
1592 A_BomoMSG_c11744_g1_i1
211bp
 cytochrome_P450,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1593 A_BomoMSG_c11745_g1_i1
293bp
FPKM:3.77 TPM:1.96
1594 A_BomoMSG_c11746_g1_i1
345bp
 zinc_finger_SWIM_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:4.00 TPM:2.08
1595 A_BomoMSG_c11748_g1_i1
607bp
FPKM:2.23 TPM:1.16
1596 A_BomoMSG_c11749_g1_i1
236bp
FPKM:4.03 TPM:2.10
1597 A_BomoMSG_c11749_g1_i2
311bp
FPKM:1.53 TPM:0.80
1598 A_BomoMSG_c11750_g1_i1
394bp
 actin_cytoskeleton-regulatory_complex_protein_PAN1_[Bombyx_mori]
FPKM:2.95 TPM:1.53
1599 A_BomoMSG_c11752_g1_i1
754bp
 uncharacterized_protein_LOC110381564_[Helicoverpa_armigera]
FPKM:1.19 TPM:0.62
1600 A_BomoMSG_c11753_g1_i1
202bp
FPKM:0.00 TPM:0.00
1601 A_BomoMSG_c11754_g1_i1
206bp
FPKM:8.05 TPM:4.19
1602 A_BomoMSG_c11755_g1_i1
531bp
 uncharacterized_protein_LOC101738425_isoform_X1_[Bombyx_mori]
FPKM:2.36 TPM:1.23
1603 A_BomoMSG_c11756_g1_i1
266bp
FPKM:2.06 TPM:1.07
1604 A_BomoMSG_c11757_g1_i1
247bp
FPKM:2.45 TPM:1.27
1605 A_BomoMSG_c11759_g1_i1
300bp
FPKM:7.19 TPM:3.74
1606 A_BomoMSG_c1175_g1_i1
217bp
 UPF0183_protein_CG7083_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:8.61 TPM:4.48
1607 A_BomoMSG_c11760_g1_i1
903bp
 uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
FPKM:3.42 TPM:1.78
1608 A_BomoMSG_c11761_g1_i1
498bp
FPKM:3.27 TPM:1.70
1609 A_BomoMSG_c11762_g1_i1
283bp
FPKM:3.60 TPM:1.87
1610 A_BomoMSG_c11763_g1_i1
223bp
 microtubule-associated_protein_futsch_[Bombyx_mori]
FPKM:5.58 TPM:2.90
1611 A_BomoMSG_c11765_g1_i1
3242bp
 dihydropyrimidine_dehydrogenase_[NADP(+)]_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0019483 P beta-alanine biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:52.48 TPM:27.30
1612 A_BomoMSG_c11766_g1_i1
481bp
 otoferlin-like_isoform_X5_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0010996 P response to auditory stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016323 C basolateral plasma membrane
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0050885 P neuromuscular process controlling balance
FPKM:1.45 TPM:0.76
1613 A_BomoMSG_c11766_g1_i2
268bp
 otoferlin-like_isoform_X5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016323 C basolateral plasma membrane
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032403 F protein-containing complex binding
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0045202 C synapse
GO:0061025 P membrane fusion
GO:0090102 P cochlea development
FPKM:1.50 TPM:0.78
1614 A_BomoMSG_c11767_g1_i1
285bp
FPKM:22.39 TPM:11.65
1615 A_BomoMSG_c11768_g1_i1
274bp
FPKM:4.34 TPM:2.26
1616 A_BomoMSG_c11769_g1_i1
989bp
 thyroid_transcription_factor_1-associated_protein_26_[Bombyx_mori]
FPKM:20.50 TPM:10.67
1617 A_BomoMSG_c11769_g2_i1
2111bp
 ornithine_decarboxylase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004586 F ornithine decarboxylase activity
GO:0005737 C cytoplasm
GO:0006596 P polyamine biosynthetic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0033387 P putrescine biosynthetic process from ornithine
FPKM:80.80 TPM:42.03
1618 A_BomoMSG_c1176_g1_i1
265bp
FPKM:3.63 TPM:1.89
1619 A_BomoMSG_c11770_g1_i1
361bp
FPKM:5.97 TPM:3.10
1620 A_BomoMSG_c11771_g1_i1
763bp
 integrator_complex_subunit_9_[Bombyx_mori]
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
FPKM:19.73 TPM:10.26
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