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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1381 A_BomoMSG_c1149_g1_i1
706bp
FPKM:6.03 TPM:3.14
1382 A_BomoMSG_c114_g1_i1
219bp
FPKM:6.71 TPM:3.49
1383 A_BomoMSG_c11504_g1_i1
270bp
 uncharacterized_protein_LOC101746086_[Bombyx_mori]
FPKM:7.46 TPM:3.88
1384 A_BomoMSG_c11505_g1_i1
267bp
FPKM:8.16 TPM:4.25
1385 A_BomoMSG_c11507_g1_i1
310bp
 PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0014842 P regulation of skeletal muscle satellite cell proliferation
GO:0031062 P positive regulation of histone methylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000288 P positive regulation of myoblast proliferation
FPKM:2.25 TPM:1.17
1386 A_BomoMSG_c11507_g1_i2
325bp
 PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0014842 P regulation of skeletal muscle satellite cell proliferation
GO:0031062 P positive regulation of histone methylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000288 P positive regulation of myoblast proliferation
FPKM:0.00 TPM:0.00
1387 A_BomoMSG_c11508_g1_i1
4596bp
 neutral_alpha-glucosidase_AB-like_precursor_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0033919 F glucan 1,3-alpha-glucosidase activity
GO:0042470 C melanosome
FPKM:132.10 TPM:68.72
1388 A_BomoMSG_c11510_g1_i1
535bp
 ATP-dependent_DNA_helicase_Q1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000733 P obsolete DNA strand renaturation
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0008026 F helicase activity
GO:0008150 P biological_process
GO:0009378 F four-way junction helicase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0036310 F ATP-dependent DNA/DNA annealing activity
GO:0043140 F 3'-5' DNA helicase activity
FPKM:2.49 TPM:1.30
1389 A_BomoMSG_c11511_g1_i1
578bp
 uncharacterized_protein_LOC101744639_isoform_X2_[Bombyx_mori]
FPKM:2.52 TPM:1.31
1390 A_BomoMSG_c11513_g1_i1
273bp
FPKM:1.46 TPM:0.76
1391 A_BomoMSG_c11514_g1_i1
1298bp
 fibrillin-1,_partial_[Bombyx_mori]
FPKM:205.31 TPM:106.80
1392 A_BomoMSG_c11515_g1_i1
228bp
FPKM:4.50 TPM:2.34
1393 A_BomoMSG_c11517_g1_i1
351bp
 SNF-related_serine/threonine-protein_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0043523 P regulation of neuron apoptotic process
GO:0046872 F metal ion binding
FPKM:2.09 TPM:1.09
1394 A_BomoMSG_c11518_g1_i1
278bp
FPKM:0.93 TPM:0.49
1395 A_BomoMSG_c11521_g1_i1
209bp
 PREDICTED:_uncharacterized_protein_LOC105389710_[Plutella_xylostella]
FPKM:4.81 TPM:2.50
1396 A_BomoMSG_c11522_g1_i1
208bp
 canalicular_multispecific_organic_anion_transporter_1-like,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.03 TPM:1.06
1397 A_BomoMSG_c11522_g1_i2
602bp
 multidrug_resistance-associated_protein_1_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.11 TPM:1.10
1398 A_BomoMSG_c11523_g1_i1
402bp
 dmX-like_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.14 TPM:1.11
1399 A_BomoMSG_c11523_g2_i1
431bp
 dmX-like_protein_2_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0008021 C synaptic vesicle
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
FPKM:2.56 TPM:1.33
1400 A_BomoMSG_c11524_g1_i1
237bp
 piggyBac_transposable_element-derived_protein_3-like,_partial_[Bombyx_mori]
FPKM:1.36 TPM:0.71
1401 A_BomoMSG_c11524_g2_i1
715bp
 piggyBac_transposable_element-derived_protein_3-like,_partial_[Bombyx_mori]
FPKM:2.12 TPM:1.10
1402 A_BomoMSG_c11525_g1_i1
281bp
FPKM:17.80 TPM:9.26
1403 A_BomoMSG_c11526_g1_i1
801bp
 signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
FPKM:30.91 TPM:16.08
1404 A_BomoMSG_c11527_g1_i1
678bp
 mitochondrial_protein_import_protein_ZIM17-like_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:27.78 TPM:14.45
1405 A_BomoMSG_c11528_g1_i1
322bp
 PREDICTED:_uncharacterized_protein_LOC103310599_[Acyrthosiphon_pisum]
FPKM:5.58 TPM:2.90
1406 A_BomoMSG_c11529_g1_i1
755bp
FPKM:15680.54 TPM:8157.33
1407 A_BomoMSG_c1152_g1_i1
258bp
 glutamate_receptor_ionotropic,_delta-1-like_[Bombyx_mori]
FPKM:2.76 TPM:1.43
1408 A_BomoMSG_c11531_g1_i1
504bp
 PREDICTED:_uncharacterized_protein_LOC106709039,_partial_[Papilio_machaon]
FPKM:2.20 TPM:1.14
1409 A_BomoMSG_c11532_g1_i1
552bp
 uncharacterized_protein_LOC101739668_isoform_X4_[Bombyx_mori]
FPKM:2.24 TPM:1.16
1410 A_BomoMSG_c11533_g1_i1
2320bp
 tumor_protein_D54_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0046982 F protein heterodimerization activity
GO:0048471 C perinuclear region of cytoplasm
FPKM:34.95 TPM:18.18
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