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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1321 A_BomoMSG_c11432_g1_i2
221bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744503_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1322 A_BomoMSG_c11433_g1_i1
370bp
FPKM:3.54 TPM:1.84
1323 A_BomoMSG_c11436_g1_i1
503bp
FPKM:24.44 TPM:12.71
1324 A_BomoMSG_c11437_g1_i1
910bp
 carboxylesterase_clade_H,_member_1_precursor_[Bombyx_mori]
FPKM:2.60 TPM:1.35
1325 A_BomoMSG_c11439_g1_i1
322bp
 1-acylglycerol-3-phosphate_O-acyltransferase_ABHD5_isoform_X1_[Bombyx_mori]
FPKM:6.97 TPM:3.63
1326 A_BomoMSG_c11440_g1_i1
428bp
 neural_Wiskott-Aldrich_syndrome_protein_[Bombyx_mori]
GO:0002625 P regulation of T cell antigen processing and presentation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0006461 P protein-containing complex assembly
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0008154 P actin polymerization or depolymerization
GO:0008544 P epidermis development
GO:0012506 C vesicle membrane
GO:0015629 C actin cytoskeleton
GO:0016197 P endosomal transport
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0030041 P actin filament polymerization
GO:0030048 P actin filament-based movement
GO:0030695 F GTPase regulator activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042110 P T cell activation
GO:0042802 F identical protein binding
GO:0043274 F phospholipase binding
GO:0050790 P regulation of catalytic activity
GO:0050852 P T cell receptor signaling pathway
GO:0070062 C extracellular exosome
GO:2000146 P negative regulation of cell motility
GO:2000601 P positive regulation of Arp2/3 complex-mediated actin nucleation
FPKM:3.45 TPM:1.79
1327 A_BomoMSG_c11441_g1_i1
398bp
FPKM:7.00 TPM:3.64
1328 A_BomoMSG_c11442_g1_i1
272bp
FPKM:6.36 TPM:3.31
1329 A_BomoMSG_c11443_g1_i1
343bp
 tigger_transposable_element-derived_protein_4-like_[Bombyx_mori]
FPKM:4.04 TPM:2.10
1330 A_BomoMSG_c11445_g1_i1
202bp
 gamma-glutamylcyclotransferase-like_[Helicoverpa_armigera]
GO:0001836 P release of cytochrome c from mitochondria
GO:0003839 F gamma-glutamylcyclotransferase activity
GO:0005829 C cytosol
GO:0006750 P glutathione biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0042803 F protein homodimerization activity
FPKM:3.21 TPM:1.67
1331 A_BomoMSG_c11446_g1_i1
322bp
FPKM:1.11 TPM:0.58
1332 A_BomoMSG_c11446_g1_i2
441bp
FPKM:4.70 TPM:2.44
1333 A_BomoMSG_c11447_g1_i1
271bp
FPKM:1.48 TPM:0.77
1334 A_BomoMSG_c11448_g1_i1
506bp
 translationally-controlled_tumor_protein_homolog_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:10.10 TPM:5.25
1335 A_BomoMSG_c11449_g1_i1
365bp
 protein_cramped_[Bombyx_mori]
FPKM:0.49 TPM:0.25
1336 A_BomoMSG_c11449_g1_i2
868bp
 protein_cramped_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
FPKM:2.94 TPM:1.53
1337 A_BomoMSG_c1144_g1_i1
247bp
 translation_elongation_factor_2_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0008150 P biological_process
FPKM:1.83 TPM:0.95
1338 A_BomoMSG_c11451_g1_i1
474bp
 olfactory_receptor_40_[Bombyx_mori]
FPKM:5.36 TPM:2.79
1339 A_BomoMSG_c11452_g1_i1
433bp
FPKM:2.54 TPM:1.32
1340 A_BomoMSG_c11455_g1_i1
264bp
 chromosome-associated_kinesin_KIF4_isoform_X4_[Bombyx_mori]
FPKM:2.62 TPM:1.36
1341 A_BomoMSG_c11456_g1_i1
280bp
 uncharacterized_protein_LOC101736167_[Bombyx_mori]
FPKM:1.84 TPM:0.96
1342 A_BomoMSG_c11458_g1_i1
411bp
 uncharacterized_protein_LOC105842278,_partial_[Bombyx_mori]
FPKM:5.51 TPM:2.87
1343 A_BomoMSG_c11459_g1_i1
387bp
 Ankyrin-3_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007528 P neuromuscular junction development
GO:0008092 F cytoskeletal protein binding
GO:0008093 F cytoskeletal anchor activity
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0010650 P positive regulation of cell communication by electrical coupling
GO:0010765 P positive regulation of sodium ion transport
GO:0010960 P magnesium ion homeostasis
GO:0014704 C intercalated disc
GO:0014731 C spectrin-associated cytoskeleton
GO:0016020 C membrane
GO:0016529 C sarcoplasmic reticulum
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030315 C T-tubule
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030507 F spectrin binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0031594 C neuromuscular junction
GO:0033268 C node of Ranvier
GO:0034112 P positive regulation of homotypic cell-cell adhesion
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043034 C costamere
GO:0043194 C axon initial segment
GO:0043266 P regulation of potassium ion transport
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045296 F cadherin binding
GO:0045838 P positive regulation of membrane potential
GO:0071286 P cellular response to magnesium ion
GO:0071709 P membrane assembly
GO:0072659 P protein localization to plasma membrane
GO:0072661 P protein localization to plasma membrane
GO:0090314 P positive regulation of protein targeting to membrane
GO:1900827 P positive regulation of membrane depolarization during cardiac muscle cell action potential
GO:1902260 P negative regulation of delayed rectifier potassium channel activity
GO:2000651 P positive regulation of sodium ion transmembrane transporter activity
GO:2001259 P positive regulation of cation channel activity
FPKM:3.03 TPM:1.58
1344 A_BomoMSG_c1145_g1_i1
386bp
 patj_homolog_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
FPKM:2.79 TPM:1.45
1345 A_BomoMSG_c11460_g1_i1
349bp
 uncharacterized_protein_LOC101738019_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1346 A_BomoMSG_c11460_g1_i2
458bp
 uncharacterized_protein_LOC101738019_[Bombyx_mori]
FPKM:4.47 TPM:2.33
1347 A_BomoMSG_c11461_g1_i1
398bp
 LOW_QUALITY_PROTEIN:_ubiquinone_biosynthesis_monooxygenase_COQ6,_mitochondrial_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0006744 P ubiquinone biosynthetic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016709 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0042995 C cell projection
GO:0044550 P secondary metabolite biosynthetic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
FPKM:2.66 TPM:1.38
1348 A_BomoMSG_c11462_g1_i1
268bp
FPKM:2.53 TPM:1.32
1349 A_BomoMSG_c11462_g1_i2
219bp
FPKM:0.00 TPM:0.00
1350 A_BomoMSG_c11463_g1_i1
723bp
 leucine-rich_repeat-containing_protein_58_[Bombyx_mori]
FPKM:3.55 TPM:1.85
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