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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1261 A_BomoMSG_c11377_g1_i1
446bp
 MARVEL_domain-containing_protein_1_[Bombyx_mori]
FPKM:4.05 TPM:2.11
1262 A_BomoMSG_c11377_g2_i1
322bp
 MARVEL_domain-containing_protein_1_[Bombyx_mori]
FPKM:5.58 TPM:2.90
1263 A_BomoMSG_c11379_g1_i1
959bp
FPKM:47.07 TPM:24.49
1264 A_BomoMSG_c1137_g1_i1
306bp
FPKM:1.54 TPM:0.80
1265 A_BomoMSG_c11382_g1_i1
290bp
FPKM:4.70 TPM:2.45
1266 A_BomoMSG_c11382_g1_i2
294bp
FPKM:0.00 TPM:0.00
1267 A_BomoMSG_c11383_g1_i1
301bp
FPKM:3.17 TPM:1.65
1268 A_BomoMSG_c11384_g1_i1
340bp
 dedicator_of_cytokinesis_protein_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0030334 P regulation of cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
FPKM:2.21 TPM:1.15
1269 A_BomoMSG_c11385_g1_i1
276bp
FPKM:5.22 TPM:2.71
1270 A_BomoMSG_c11386_g1_i1
1056bp
 uncharacterized_protein_LOC101739352_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
FPKM:3.57 TPM:1.86
1271 A_BomoMSG_c11387_g1_i1
252bp
FPKM:0.00 TPM:0.00
1272 A_BomoMSG_c11387_g1_i2
310bp
FPKM:0.00 TPM:0.00
1273 A_BomoMSG_c11387_g1_i3
300bp
FPKM:0.40 TPM:0.21
1274 A_BomoMSG_c11388_g1_i1
697bp
 exportin-7,_partial_[Bombyx_mori]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
FPKM:2.41 TPM:1.25
1275 A_BomoMSG_c11389_g1_i1
1154bp
FPKM:5.23 TPM:2.72
1276 A_BomoMSG_c11389_g1_i2
1131bp
FPKM:31.39 TPM:16.33
1277 A_BomoMSG_c1138_g1_i1
201bp
FPKM:9.79 TPM:5.09
1278 A_BomoMSG_c11390_g1_i1
696bp
 LOW_QUALITY_PROTEIN:_neurobeachin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007528 P neuromuscular junction development
GO:0007614 P short-term memory
GO:0008104 P protein localization
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0042462 P eye photoreceptor cell development
GO:0042675 P compound eye cone cell differentiation
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
GO:0051018 F protein kinase A binding
FPKM:2.74 TPM:1.43
1279 A_BomoMSG_c11393_g1_i1
671bp
FPKM:2.41 TPM:1.26
1280 A_BomoMSG_c11394_g1_i1
1094bp
 sideroflexin-2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015075 F ion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
FPKM:0.00 TPM:0.00
1281 A_BomoMSG_c11394_g1_i2
1567bp
 sideroflexin-2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015075 F ion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
FPKM:27.69 TPM:14.41
1282 A_BomoMSG_c11396_g1_i1
1002bp
 transcription_termination_factor_5,_mitochondrial-like_[Bombyx_mori]
FPKM:6.21 TPM:3.23
1283 A_BomoMSG_c11396_g1_i2
1786bp
 transcription_termination_factor_5,_mitochondrial-like_[Bombyx_mori]
FPKM:14.11 TPM:7.34
1284 A_BomoMSG_c11397_g1_i1
251bp
 PREDICTED:_kelch-like_protein_diablo_[Ceratina_calcarata]
FPKM:7.65 TPM:3.98
1285 A_BomoMSG_c11398_g1_i1
429bp
FPKM:1.07 TPM:0.56
1286 A_BomoMSG_c1139_g1_i1
414bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.18 TPM:1.65
1287 A_BomoMSG_c113_g1_i1
238bp
 kinase_suppressor_of_Ras_2_isoform_X2_[Bombyx_mori]
FPKM:3.35 TPM:1.74
1288 A_BomoMSG_c11400_g1_i1
818bp
FPKM:3.59 TPM:1.87
1289 A_BomoMSG_c11401_g1_i1
201bp
LOW_QUALITY_PROTEIN:_conserved_hypothetical_protein,_partial_[Streptomyces_lividans_TK24]
FPKM:2.18 TPM:1.13
1290 A_BomoMSG_c11401_g1_i2
222bp
FPKM:0.00 TPM:0.00
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