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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1231 A_BomoMSG_c11343_g1_i1
408bp
 39S_ribosomal_protein_L14,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:8.50 TPM:4.42
1232 A_BomoMSG_c11343_g1_i2
560bp
 39S_ribosomal_protein_L14,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:18.77 TPM:9.76
1233 A_BomoMSG_c11345_g1_i1
210bp
FPKM:10.44 TPM:5.43
1234 A_BomoMSG_c11346_g1_i1
405bp
FPKM:1.18 TPM:0.61
1235 A_BomoMSG_c11347_g1_i1
499bp
 neurofilament_heavy_polypeptide_isoform_X1_[Bombyx_mori]
FPKM:1.72 TPM:0.89
1236 A_BomoMSG_c11347_g1_i2
464bp
 neurofilament_heavy_polypeptide_isoform_X1_[Bombyx_mori]
FPKM:1.71 TPM:0.89
1237 A_BomoMSG_c1134_g1_i1
236bp
 ankyrin-3_[Bombyx_mori]
FPKM:6.85 TPM:3.56
1238 A_BomoMSG_c11350_g1_i1
771bp
 rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]
FPKM:2.18 TPM:1.13
1239 A_BomoMSG_c11350_g1_i2
877bp
 rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]
FPKM:1.68 TPM:0.88
1240 A_BomoMSG_c11352_g1_i1
433bp
 LOW_QUALITY_PROTEIN:_gastrula_zinc_finger_protein_XlCGF49.1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:5.29 TPM:2.75
1241 A_BomoMSG_c11353_g1_i1
309bp
FPKM:1.88 TPM:0.98
1242 A_BomoMSG_c11354_g1_i1
288bp
FPKM:4.77 TPM:2.48
1243 A_BomoMSG_c11357_g1_i1
1349bp
 uncharacterized_protein_LOC105842293_[Bombyx_mori]
FPKM:1.65 TPM:0.86
1244 A_BomoMSG_c11358_g1_i1
209bp
FPKM:0.96 TPM:0.50
1245 A_BomoMSG_c11359_g1_i1
203bp
FPKM:1.05 TPM:0.55
1246 A_BomoMSG_c11360_g1_i1
246bp
 reverse_transcriptase,_partial_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.47 TPM:1.28
1247 A_BomoMSG_c11361_g1_i1
575bp
FPKM:2.40 TPM:1.25
1248 A_BomoMSG_c11362_g1_i1
272bp
 putative_ATP-dependent_RNA_helicase_DHX33_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
FPKM:3.92 TPM:2.04
1249 A_BomoMSG_c11363_g1_i1
504bp
 SLIT_and_NTRK-like_protein_4_[Bombyx_mori]
FPKM:2.88 TPM:1.50
1250 A_BomoMSG_c11364_g1_i1
265bp
FPKM:5.71 TPM:2.97
1251 A_BomoMSG_c11366_g1_i1
271bp
FPKM:1.97 TPM:1.03
1252 A_BomoMSG_c11367_g1_i1
395bp
 inositol_1,4,5-trisphosphate_receptor_isoform_X2_[Bombyx_mori]
GO:0000280 P nuclear division
GO:0005216 F ion channel activity
GO:0005220 F inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity
GO:0005262 F calcium channel activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007591 P molting cycle, chitin-based cuticle
GO:0007601 P visual perception
GO:0007608 P sensory perception of smell
GO:0007629 P flight behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0030322 P stabilization of membrane potential
GO:0030536 P larval feeding behavior
GO:0035071 P salivary gland cell autophagic cell death
GO:0042594 P response to starvation
GO:0048016 P inositol phosphate-mediated signaling
GO:0050896 P response to stimulus
GO:0050909 P sensory perception of taste
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051482 P positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway
GO:0055085 P transmembrane transport
GO:0055089 P fatty acid homeostasis
GO:0060259 P regulation of feeding behavior
GO:0070588 P calcium ion transmembrane transport
FPKM:2.20 TPM:1.15
1253 A_BomoMSG_c11368_g1_i1
650bp
FPKM:1.80 TPM:0.93
1254 A_BomoMSG_c11369_g1_i1
370bp
 anoctamin-4_isoform_X3_[Bombyx_mori]
GO:0005229 F intracellular calcium activated chloride channel activity
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0034220 P ion transmembrane transport
GO:0034707 C chloride channel complex
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:1902476 P chloride transmembrane transport
FPKM:4.36 TPM:2.27
1255 A_BomoMSG_c1136_g1_i1
208bp
 hypothetical_protein_KGM_214556_[Danaus_plexippus_plexippus]
FPKM:3.91 TPM:2.03
1256 A_BomoMSG_c11372_g1_i1
556bp
 acyl-CoA_Delta(11)_desaturase-like_[Bombyx_mori]
GO:0004768 F stearoyl-CoA 9-desaturase activity
GO:0005506 F iron ion binding
GO:0005623 C obsolete cell
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006636 P unsaturated fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070542 P response to fatty acid
FPKM:4.43 TPM:2.30
1257 A_BomoMSG_c11373_g1_i1
276bp
FPKM:2.85 TPM:1.48
1258 A_BomoMSG_c11374_g1_i1
1166bp
 ubiquitin_conjugating_enzyme_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
FPKM:2.14 TPM:1.12
1259 A_BomoMSG_c11374_g1_i2
1240bp
 ubiquitin_conjugating_enzyme_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
FPKM:29.60 TPM:15.40
1260 A_BomoMSG_c11376_g1_i1
285bp
FPKM:0.89 TPM:0.46
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