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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1051 A_BomoMSG_c11151_g1_i3
294bp
 sex-linked_proline_rich_protein,_partial_[Bombyx_mori]
FPKM:3.74 TPM:1.95
1052 A_BomoMSG_c11152_g1_i1
372bp
FPKM:2.97 TPM:1.55
1053 A_BomoMSG_c11155_g1_i1
336bp
 histone_acetyltransferase_KAT6A_isoform_X2_[Bombyx_mori]
FPKM:3.22 TPM:1.68
1054 A_BomoMSG_c11156_g1_i1
364bp
FPKM:4.20 TPM:2.19
1055 A_BomoMSG_c11158_g1_i1
241bp
FPKM:6.50 TPM:3.38
1056 A_BomoMSG_c11159_g1_i1
317bp
FPKM:2.15 TPM:1.12
1057 A_BomoMSG_c11159_g1_i2
395bp
 PREDICTED:_trimeric_intracellular_cation_channel_type_B_[Papilio_polytes]
FPKM:0.00 TPM:0.00
1058 A_BomoMSG_c1115_g1_i1
237bp
FPKM:1.36 TPM:0.71
1059 A_BomoMSG_c11160_g1_i1
429bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
FPKM:2.36 TPM:1.23
1060 A_BomoMSG_c11161_g1_i1
261bp
 pheromone_biosynthesis_activating_neuropeptide_receptor_[Bombyx_mori]
FPKM:2.68 TPM:1.40
1061 A_BomoMSG_c11161_g1_i2
257bp
 pheromone_biosynthesis_activating_neuropeptide_receptor_isoform_A_[Bombyx_mori]
GO:0001607 F neuromedin U receptor activity
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007589 P body fluid secretion
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0051928 P positive regulation of calcium ion transport
GO:0071465 P cellular response to desiccation
FPKM:1.67 TPM:0.87
1062 A_BomoMSG_c11163_g1_i1
244bp
FPKM:10.08 TPM:5.24
1063 A_BomoMSG_c11164_g1_i1
374bp
FPKM:9.10 TPM:4.73
1064 A_BomoMSG_c11165_g1_i1
558bp
 replication_protein_A3_[Bombyx_mori]
FPKM:27.60 TPM:14.36
1065 A_BomoMSG_c11167_g1_i1
259bp
FPKM:2.19 TPM:1.14
1066 A_BomoMSG_c11168_g1_i1
309bp
 WD_repeat_and_FYVE_domain-containing_protein_3_isoform_X1_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
FPKM:2.26 TPM:1.18
1067 A_BomoMSG_c11169_g1_i1
688bp
FPKM:2.23 TPM:1.16
1068 A_BomoMSG_c1116_g1_i1
327bp
 uncharacterized_protein_LOC101746973_isoform_X2_[Bombyx_mori]
FPKM:2.03 TPM:1.06
1069 A_BomoMSG_c11170_g1_i1
306bp
FPKM:11.14 TPM:5.79
1070 A_BomoMSG_c11173_g1_i1
419bp
 plexin-B_[Bombyx_mori]
GO:0002116 C semaphorin receptor complex
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0030154 P cell differentiation
GO:0030334 P regulation of cell migration
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071678 P olfactory bulb axon guidance
GO:0097374 P sensory neuron axon guidance
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
FPKM:3.34 TPM:1.74
1071 A_BomoMSG_c11174_g1_i1
1445bp
 ribosomal_L1_domain-containing_protein_CG13096_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
FPKM:47.20 TPM:24.56
1072 A_BomoMSG_c11176_g1_i1
852bp
 PHD_finger_protein_rhinoceros_[Bombyx_mori]
FPKM:1.11 TPM:0.58
1073 A_BomoMSG_c11177_g1_i1
223bp
FPKM:1.59 TPM:0.83
1074 A_BomoMSG_c11178_g1_i1
220bp
FPKM:0.83 TPM:0.43
1075 A_BomoMSG_c11178_g1_i2
208bp
FPKM:2.93 TPM:1.52
1076 A_BomoMSG_c1117_g1_i1
358bp
FPKM:2.02 TPM:1.05
1077 A_BomoMSG_c1117_g1_i2
284bp
FPKM:0.00 TPM:0.00
1078 A_BomoMSG_c11180_g1_i1
425bp
FPKM:2.83 TPM:1.47
1079 A_BomoMSG_c11181_g1_i1
324bp
FPKM:2.41 TPM:1.25
1080 A_BomoMSG_c11182_g1_i1
1017bp
 transmembrane_emp24_domain-containing_protein_5_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0070971 C endoplasmic reticulum exit site
GO:0090161 P Golgi ribbon formation
FPKM:143.79 TPM:74.80
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