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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5221 A_BomoASG_c16238_g1_i1
1382bp
FPKM:31.11 TPM:23.86
5222 A_BomoASG_c16239_g1_i1
1113bp
 neurofibromin_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001937 P negative regulation of endothelial cell proliferation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0001952 P regulation of cell-matrix adhesion
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0007519 P skeletal muscle tissue development
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010468 P regulation of gene expression
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016525 P negative regulation of angiogenesis
GO:0021510 P spinal cord development
GO:0021764 P amygdala development
GO:0021897 P forebrain astrocyte development
GO:0021915 P neural tube development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030336 P negative regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0034605 P cellular response to heat
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0042060 P wound healing
GO:0042127 P regulation of cell population proliferation
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043407 P negative regulation of MAP kinase activity
GO:0043408 P regulation of MAPK cascade
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043535 P regulation of blood vessel endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045671 P negative regulation of osteoclast differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046929 P negative regulation of neurotransmitter secretion
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048712 P negative regulation of astrocyte differentiation
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
GO:0050890 P cognition
GO:0061534 P gamma-aminobutyric acid secretion, neurotransmission
GO:0061535 P glutamate secretion, neurotransmission
GO:0098597 P observational learning
GO:0098793 C presynapse
GO:1900271 P regulation of long-term synaptic potentiation
GO:1902043 P positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
FPKM:2.65 TPM:2.03
5223 A_BomoASG_c1623_g1_i1
2707bp
 putative_ferric-chelate_reductase_1_homolog_[Bombyx_mori]
GO:0000293 F ferric-chelate reductase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:47.35 TPM:36.32
5224 A_BomoASG_c16240_g1_i1
282bp
 putative_zinc_binding_dehydrogenase_[Operophtera_brumata]
FPKM:2.29 TPM:1.75
5225 A_BomoASG_c16240_g1_i2
208bp
 PREDICTED:_probable_trans-2-enoyl-CoA_reductase,_mitochondrial_[Papilio_polytes]
FPKM:1.00 TPM:0.77
5226 A_BomoASG_c16242_g1_i1
353bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like,_partial_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:6.80 TPM:5.22
5227 A_BomoASG_c16245_g1_i1
434bp
 uncharacterized_protein_LOC110383276_[Helicoverpa_armigera]
FPKM:0.14 TPM:0.11
5228 A_BomoASG_c16245_g1_i2
749bp
 uncharacterized_protein_LOC110383276_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.30 TPM:1.00
5229 A_BomoASG_c16245_g1_i3
355bp
 uncharacterized_protein_LOC110383276_[Helicoverpa_armigera]
FPKM:0.65 TPM:0.50
5230 A_BomoASG_c16247_g1_i1
429bp
FPKM:7.50 TPM:5.75
5231 A_BomoASG_c16248_g1_i1
260bp
FPKM:1.64 TPM:1.26
5232 A_BomoASG_c16249_g1_i1
228bp
FPKM:6.88 TPM:5.28
5233 A_BomoASG_c16251_g1_i1
337bp
FPKM:2.57 TPM:1.97
5234 A_BomoASG_c16251_g2_i1
475bp
 uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.47 TPM:1.13
5235 A_BomoASG_c16252_g1_i1
207bp
FPKM:4.06 TPM:3.12
5236 A_BomoASG_c16255_g1_i1
514bp
FPKM:4.42 TPM:3.39
5237 A_BomoASG_c16256_g1_i1
389bp
 PREDICTED:_uncharacterized_protein_LOC105385644_[Plutella_xylostella]
FPKM:1.75 TPM:1.35
5238 A_BomoASG_c16257_g1_i1
549bp
 uncharacterized_protein_LOC101739011_[Bombyx_mori]
FPKM:3.88 TPM:2.98
5239 A_BomoASG_c16258_g1_i1
203bp
 PREDICTED:_uncharacterized_protein_LOC105386758_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
5240 A_BomoASG_c16261_g1_i1
286bp
FPKM:7.98 TPM:6.12
5241 A_BomoASG_c16262_g1_i1
254bp
FPKM:3.48 TPM:2.67
5242 A_BomoASG_c16263_g1_i1
470bp
FPKM:27.68 TPM:21.23
5243 A_BomoASG_c16264_g1_i1
884bp
 zinc_finger_protein_836_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:4.04 TPM:3.10
5244 A_BomoASG_c16265_g1_i1
325bp
FPKM:1.03 TPM:0.79
5245 A_BomoASG_c16266_g1_i1
391bp
FPKM:5.22 TPM:4.00
5246 A_BomoASG_c16267_g1_i1
207bp
 PREDICTED:_tubulin_alpha-1D_chain-like,_partial_[Haplochromis_burtoni]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0008152 P metabolic process
FPKM:7.11 TPM:5.45
5247 A_BomoASG_c16268_g1_i1
217bp
FPKM:0.00 TPM:0.00
5248 A_BomoASG_c16268_g1_i2
211bp
FPKM:2.87 TPM:2.20
5249 A_BomoASG_c1626_g1_i1
253bp
FPKM:0.58 TPM:0.45
5250 A_BomoASG_c16273_g1_i1
286bp
FPKM:8.43 TPM:6.46
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