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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5191 A_BomoASG_c16196_g1_i1
223bp
FPKM:1.63 TPM:1.25
5192 A_BomoASG_c16197_g1_i1
245bp
FPKM:3.18 TPM:2.44
5193 A_BomoASG_c16198_g1_i1
357bp
FPKM:4.35 TPM:3.34
5194 A_BomoASG_c16199_g1_i1
278bp
FPKM:11.79 TPM:9.04
5195 A_BomoASG_c1619_g1_i1
241bp
FPKM:1.98 TPM:1.52
5196 A_BomoASG_c161_g1_i1
246bp
 venom_carboxylesterase-6_[Bombyx_mori]
FPKM:2.51 TPM:1.92
5197 A_BomoASG_c16200_g1_i1
1130bp
 nuclear_Y/CCAAT-box_binding_factor_C_subunit_NF/YC_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016602 C CCAAT-binding factor complex
GO:0046982 F protein heterodimerization activity
FPKM:5.94 TPM:4.56
5198 A_BomoASG_c16200_g1_i2
980bp
 nuclear_Y/CCAAT-box_binding_factor_C_subunit_NF/YC_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016602 C CCAAT-binding factor complex
GO:0046982 F protein heterodimerization activity
FPKM:12.70 TPM:9.74
5199 A_BomoASG_c16201_g1_i1
905bp
FPKM:1.96 TPM:1.51
5200 A_BomoASG_c16202_g1_i1
210bp
FPKM:6.80 TPM:5.21
5201 A_BomoASG_c16204_g1_i1
417bp
FPKM:2.02 TPM:1.55
5202 A_BomoASG_c16205_g1_i1
231bp
FPKM:3.69 TPM:2.83
5203 A_BomoASG_c16208_g1_i1
592bp
FPKM:4.18 TPM:3.20
5204 A_BomoASG_c1620_g1_i1
327bp
 condensin_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0000796 C condensin complex
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
FPKM:2.38 TPM:1.83
5205 A_BomoASG_c16211_g1_i1
261bp
 uncharacterized_protein_LOC101740418_[Bombyx_mori]
FPKM:1.09 TPM:0.83
5206 A_BomoASG_c16212_g1_i1
1103bp
 dynactin_subunit_6_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
FPKM:16.42 TPM:12.60
5207 A_BomoASG_c16213_g1_i1
215bp
FPKM:11.76 TPM:9.02
5208 A_BomoASG_c16215_g1_i1
470bp
FPKM:1.87 TPM:1.43
5209 A_BomoASG_c16216_g1_i1
452bp
FPKM:1.58 TPM:1.21
5210 A_BomoASG_c16218_g1_i1
513bp
FPKM:1.81 TPM:1.39
5211 A_BomoASG_c16221_g1_i1
340bp
FPKM:4.75 TPM:3.64
5212 A_BomoASG_c16222_g1_i1
209bp
FPKM:5.91 TPM:4.54
5213 A_BomoASG_c16223_g1_i1
643bp
 probable_cytochrome_P450_49a1-like_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.81 TPM:1.39
5214 A_BomoASG_c16224_g1_i1
207bp
hypothetical_protein_[Macaca_fascicularis]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
5215 A_BomoASG_c16226_g1_i1
382bp
FPKM:0.00 TPM:0.00
5216 A_BomoASG_c16226_g1_i2
480bp
FPKM:3.07 TPM:2.36
5217 A_BomoASG_c1622_g1_i1
887bp
FPKM:2.42 TPM:1.85
5218 A_BomoASG_c16231_g1_i1
677bp
 U2_small_nuclear_ribonucleoprotein_auxiliary_factor_35_kDa_subunit-related_protein_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0089701 C U2AF complex
FPKM:2.71 TPM:2.08
5219 A_BomoASG_c16235_g1_i1
339bp
FPKM:13.04 TPM:10.00
5220 A_BomoASG_c16237_g1_i1
521bp
 ATP-binding_cassette_sub-family_G_member_1,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
FPKM:4.50 TPM:3.45
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