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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4951 A_BomoASG_c15942_g2_i1
1162bp
 dynein_assembly_factor_5,_axonemal_[Bombyx_mori]
GO:0003341 P cilium movement
GO:0005737 C cytoplasm
GO:0030030 P cell projection organization
GO:0031514 C motile cilium
GO:0036158 P outer dynein arm assembly
GO:0036159 P inner dynein arm assembly
GO:0045505 F dynein intermediate chain binding
FPKM:2.11 TPM:1.62
4952 A_BomoASG_c15943_g1_i1
593bp
FPKM:10.88 TPM:8.35
4953 A_BomoASG_c15944_g1_i1
288bp
FPKM:2.19 TPM:1.68
4954 A_BomoASG_c15945_g1_i1
979bp
 enhancer_of_polycomb_homolog_1,_partial_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0031965 C nuclear membrane
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0035886 P vascular associated smooth muscle cell differentiation
GO:0040008 P regulation of growth
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0045814 P negative regulation of gene expression, epigenetic
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:3.15 TPM:2.41
4955 A_BomoASG_c15946_g1_i1
500bp
 olfactory_receptor_[Bombyx_mori]
FPKM:2.05 TPM:1.57
4956 A_BomoASG_c15947_g1_i1
415bp
 exportin-2_[Bombyx_mori]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006909 P phagocytosis
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0022008 P neurogenesis
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
FPKM:5.64 TPM:4.33
4957 A_BomoASG_c15948_g1_i1
602bp
 PREDICTED:_uncharacterized_protein_LOC106717302_[Papilio_machaon]
FPKM:1.05 TPM:0.81
4958 A_BomoASG_c15949_g1_i1
276bp
 hypothetical_protein_RF55_13198_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.44 TPM:1.10
4959 A_BomoASG_c1594_g1_i1
2101bp
 uncharacterized_protein_LOC101736658_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
FPKM:204.55 TPM:156.90
4960 A_BomoASG_c15950_g1_i1
254bp
 hypothetical_protein_RR46_03787,_partial_[Papilio_xuthus]
FPKM:0.58 TPM:0.44
4961 A_BomoASG_c15952_g1_i1
351bp
 adenylate_kinase_isoenzyme_5_isoform_X1_[Bombyx_mori]
FPKM:2.39 TPM:1.83
4962 A_BomoASG_c15956_g1_i1
245bp
 Uncharacterized_protein_OBRU01_08842_[Operophtera_brumata]
FPKM:1.90 TPM:1.46
4963 A_BomoASG_c15957_g1_i1
309bp
FPKM:1.89 TPM:1.45
4964 A_BomoASG_c15958_g1_i1
367bp
FPKM:1.94 TPM:1.48
4965 A_BomoASG_c15959_g1_i1
3189bp
 organic_cation_transporter_protein_isoform_X1_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:49.51 TPM:37.98
4966 A_BomoASG_c15959_g1_i2
1999bp
 PREDICTED:_uncharacterized_protein_LOC106140897_[Amyelois_transitella]
FPKM:23.55 TPM:18.06
4967 A_BomoASG_c1595_g1_i1
407bp
FPKM:0.93 TPM:0.71
4968 A_BomoASG_c15961_g1_i1
1167bp
 peroxisome_biogenesis_factor_10_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016558 P protein import into peroxisome matrix
GO:0046872 F metal ion binding
FPKM:26.57 TPM:20.38
4969 A_BomoASG_c15962_g1_i1
457bp
FPKM:1.03 TPM:0.79
4970 A_BomoASG_c15962_g1_i2
411bp
FPKM:0.85 TPM:0.66
4971 A_BomoASG_c15964_g1_i1
444bp
FPKM:2.24 TPM:1.72
4972 A_BomoASG_c15965_g1_i1
239bp
FPKM:2.02 TPM:1.55
4973 A_BomoASG_c15966_g1_i1
349bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.21 TPM:0.93
4974 A_BomoASG_c15967_g1_i1
209bp
 DENN_domain-containing_protein_1A_isoform_X3_[Bombyx_mori]
FPKM:9.86 TPM:7.56
4975 A_BomoASG_c15968_g1_i1
629bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101741510_[Bombyx_mori]
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
FPKM:1.99 TPM:1.52
4976 A_BomoASG_c15969_g1_i1
324bp
FPKM:4.84 TPM:3.71
4977 A_BomoASG_c15970_g1_i1
596bp
FPKM:2.00 TPM:1.54
4978 A_BomoASG_c15972_g1_i1
253bp
FPKM:14.04 TPM:10.77
4979 A_BomoASG_c15974_g1_i1
258bp
FPKM:36.29 TPM:27.84
4980 A_BomoASG_c15975_g1_i1
439bp
FPKM:1.24 TPM:0.95
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