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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4921 A_BomoASG_c15916_g1_i1
360bp
 PREDICTED:_uncharacterized_protein_LOC106137322_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.15 TPM:2.41
4922 A_BomoASG_c15917_g1_i1
225bp
FPKM:3.97 TPM:3.04
4923 A_BomoASG_c15919_g1_i1
588bp
FPKM:3.53 TPM:2.71
4924 A_BomoASG_c1591_g1_i1
250bp
 uncharacterized_protein_LOC101742205_[Bombyx_mori]
FPKM:6.02 TPM:4.62
4925 A_BomoASG_c15920_g1_i1
426bp
FPKM:4.12 TPM:3.16
4926 A_BomoASG_c15921_g1_i1
510bp
FPKM:4.41 TPM:3.38
4927 A_BomoASG_c15922_g1_i1
201bp
FPKM:5.58 TPM:4.28
4928 A_BomoASG_c15923_g1_i1
230bp
 uncharacterized_protein_LOC101743176_[Bombyx_mori]
FPKM:1.49 TPM:1.15
4929 A_BomoASG_c15924_g1_i1
241bp
 putative_RNA-directed_DNA_polymerase_from_transposon_BS_[Papilio_machaon]
FPKM:3.30 TPM:2.53
4930 A_BomoASG_c15925_g1_i1
560bp
FPKM:3.78 TPM:2.90
4931 A_BomoASG_c15925_g2_i1
267bp
 uncharacterized_protein_LOC101738540_[Bombyx_mori]
FPKM:1.55 TPM:1.19
4932 A_BomoASG_c15927_g1_i1
227bp
FPKM:0.77 TPM:0.59
4933 A_BomoASG_c15927_g1_i2
237bp
FPKM:0.00 TPM:0.00
4934 A_BomoASG_c15928_g1_i1
797bp
 S-adenosylmethionine_mitochondrial_carrier_protein_[Bombyx_mori]
GO:0000095 F S-adenosyl-L-methionine transmembrane transporter activity
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0015805 P S-adenosyl-L-methionine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1901962 P S-adenosyl-L-methionine transmembrane transport
FPKM:2.94 TPM:2.25
4935 A_BomoASG_c15930_g1_i1
302bp
FPKM:6.74 TPM:5.17
4936 A_BomoASG_c15931_g1_i1
252bp
 PREDICTED:_uncharacterized_protein_LOC106122315_[Papilio_xuthus]
FPKM:2.36 TPM:1.81
4937 A_BomoASG_c15933_g1_i1
539bp
FPKM:2.30 TPM:1.76
4938 A_BomoASG_c15933_g1_i2
492bp
FPKM:0.00 TPM:0.00
4939 A_BomoASG_c15933_g1_i3
414bp
FPKM:0.00 TPM:0.00
4940 A_BomoASG_c15934_g1_i1
253bp
FPKM:0.58 TPM:0.45
4941 A_BomoASG_c15935_g1_i1
596bp
 uncharacterized_protein_CG43867_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
FPKM:0.43 TPM:0.33
4942 A_BomoASG_c15935_g1_i2
710bp
 uncharacterized_protein_CG43867_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
FPKM:1.14 TPM:0.88
4943 A_BomoASG_c15938_g1_i1
572bp
 phosphatidate_cytidylyltransferase,_photoreceptor-specific_[Bombyx_mori]
GO:0004605 F phosphatidate cytidylyltransferase activity
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0007430 P terminal branching, open tracheal system
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0008654 P phospholipid biosynthetic process
GO:0010883 P regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016049 P cell growth
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0016779 F nucleotidyltransferase activity
GO:0019915 P lipid storage
GO:0043052 P thermotaxis
GO:0050896 P response to stimulus
GO:0060439 P trachea morphogenesis
FPKM:4.09 TPM:3.14
4944 A_BomoASG_c15939_g1_i1
208bp
FPKM:2.00 TPM:1.53
4945 A_BomoASG_c1593_g1_i1
292bp
 nuclear_pore_complex_protein_Nup133_[Bombyx_mori]
FPKM:3.59 TPM:2.75
4946 A_BomoASG_c1593_g1_i2
485bp
 nuclear_pore_complex_protein_Nup133_[Bombyx_mori]
FPKM:2.24 TPM:1.71
4947 A_BomoASG_c15940_g1_i1
321bp
FPKM:2.20 TPM:1.69
4948 A_BomoASG_c15940_g1_i2
242bp
FPKM:1.80 TPM:1.38
4949 A_BomoASG_c15941_g1_i1
227bp
FPKM:10.06 TPM:7.72
4950 A_BomoASG_c15942_g1_i1
370bp
 dynein_assembly_factor_5,_axonemal_[Bombyx_mori]
GO:0003341 P cilium movement
GO:0005737 C cytoplasm
GO:0030030 P cell projection organization
GO:0031514 C motile cilium
GO:0036158 P outer dynein arm assembly
GO:0036159 P inner dynein arm assembly
GO:0045505 F dynein intermediate chain binding
FPKM:1.09 TPM:0.84
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