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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4981 A_BomoASG_c15976_g1_i1
498bp
 plexin-B_[Bombyx_mori]
GO:0002116 C semaphorin receptor complex
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0030154 P cell differentiation
GO:0030334 P regulation of cell migration
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071678 P olfactory bulb axon guidance
GO:0097374 P sensory neuron axon guidance
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
FPKM:1.20 TPM:0.92
4982 A_BomoASG_c15977_g1_i1
353bp
FPKM:7.69 TPM:5.90
4983 A_BomoASG_c15979_g1_i1
304bp
 sorting_nexin-7_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0019898 C extrinsic component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
FPKM:3.52 TPM:2.70
4984 A_BomoASG_c1597_g1_i1
641bp
FPKM:4.97 TPM:3.81
4985 A_BomoASG_c15980_g1_i1
317bp
FPKM:6.13 TPM:4.70
4986 A_BomoASG_c15981_g1_i1
272bp
FPKM:2.47 TPM:1.90
4987 A_BomoASG_c15982_g1_i1
226bp
FPKM:0.78 TPM:0.60
4988 A_BomoASG_c15983_g1_i1
365bp
FPKM:1.67 TPM:1.28
4989 A_BomoASG_c15984_g1_i1
554bp
FPKM:1.18 TPM:0.90
4990 A_BomoASG_c15984_g2_i1
228bp
FPKM:1.53 TPM:1.17
4991 A_BomoASG_c15985_g1_i1
1119bp
 multiple_coagulation_factor_deficiency_protein_2_homolog_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0046872 F metal ion binding
FPKM:121.34 TPM:93.07
4992 A_BomoASG_c15985_g1_i2
1256bp
 multiple_coagulation_factor_deficiency_protein_2_homolog_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0046872 F metal ion binding
FPKM:106.64 TPM:81.80
4993 A_BomoASG_c15986_g1_i1
366bp
FPKM:2.22 TPM:1.70
4994 A_BomoASG_c15987_g1_i1
966bp
 28S_ribosomal_protein_S2,_mitochondrial_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
FPKM:18.86 TPM:14.47
4995 A_BomoASG_c15988_g1_i1
289bp
FPKM:5.64 TPM:4.33
4996 A_BomoASG_c15988_g2_i1
417bp
FPKM:4.71 TPM:3.61
4997 A_BomoASG_c15989_g1_i1
337bp
FPKM:3.86 TPM:2.96
4998 A_BomoASG_c15990_g1_i1
412bp
FPKM:1.83 TPM:1.40
4999 A_BomoASG_c15991_g1_i1
349bp
 PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.66 TPM:2.04
5000 A_BomoASG_c15991_g1_i2
243bp
 PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.78 TPM:0.60
5001 A_BomoASG_c15996_g1_i1
261bp
 unconventional_myosin-VIIa_isoform_X2_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005902 C microvillus
GO:0008152 P metabolic process
GO:0016197 P endosomal transport
GO:0016328 C lateral plasma membrane
GO:0016459 C myosin complex
GO:0016887 F ATP hydrolysis activity
GO:0030027 C lamellipodium
GO:0030048 P actin filament-based movement
GO:0045056 P transcytosis
FPKM:2.72 TPM:2.08
5002 A_BomoASG_c15997_g1_i1
260bp
 uncharacterized_protein_LOC101735330_[Bombyx_mori]
FPKM:8.22 TPM:6.31
5003 A_BomoASG_c15998_g1_i1
483bp
 histone-lysine_N-methyltransferase_trithorax_[Bombyx_mori]
FPKM:2.69 TPM:2.06
5004 A_BomoASG_c15999_g1_i1
217bp
 PREDICTED:_uncharacterized_protein_LOC105391098_[Plutella_xylostella]
FPKM:1.76 TPM:1.35
5005 A_BomoASG_c159_g1_i1
216bp
 phospholipase_D2_isoform_X1_[Bombyx_mori]
FPKM:6.24 TPM:4.79
5006 A_BomoASG_c16001_g1_i1
504bp
FPKM:1.52 TPM:1.16
5007 A_BomoASG_c16002_g1_i1
257bp
 PREDICTED:_uncharacterized_protein_LOC107073616_isoform_X1_[Polistes_dominula]
FPKM:1.13 TPM:0.86
5008 A_BomoASG_c16003_g1_i1
273bp
FPKM:1.96 TPM:1.51
5009 A_BomoASG_c16004_g1_i1
795bp
FPKM:5.62 TPM:4.31
5010 A_BomoASG_c16005_g1_i1
236bp
FPKM:3.48 TPM:2.67
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