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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4201 A_BomoASG_c15095_g1_i1
234bp
FPKM:1.43 TPM:1.09
4202 A_BomoASG_c15097_g1_i1
602bp
 transmembrane_protein_135_isoform_X1_[Bombyx_mori]
FPKM:2.77 TPM:2.12
4203 A_BomoASG_c15098_g1_i1
617bp
 28S_ribosomal_protein_S24,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:26.25 TPM:20.13
4204 A_BomoASG_c15099_g1_i1
732bp
FPKM:4.08 TPM:3.13
4205 A_BomoASG_c1509_g1_i1
207bp
FPKM:6.09 TPM:4.67
4206 A_BomoASG_c15100_g1_i1
278bp
 uncharacterized_protein_LOC105842288_[Bombyx_mori]
FPKM:2.83 TPM:2.17
4207 A_BomoASG_c15102_g1_i1
242bp
FPKM:3.92 TPM:3.01
4208 A_BomoASG_c15103_g1_i1
408bp
FPKM:2.09 TPM:1.60
4209 A_BomoASG_c15104_g1_i1
273bp
FPKM:1.47 TPM:1.13
4210 A_BomoASG_c15106_g1_i1
684bp
 PREDICTED:_triple_functional_domain_protein-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:2.45 TPM:1.88
4211 A_BomoASG_c15107_g1_i1
210bp
FPKM:2.91 TPM:2.23
4212 A_BomoASG_c15109_g1_i1
613bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.80 TPM:1.38
4213 A_BomoASG_c15110_g1_i1
652bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.21 TPM:1.69
4214 A_BomoASG_c15110_g1_i2
207bp
 organic_cation_transporter_protein-like_[Bombyx_mori]
FPKM:1.37 TPM:1.05
4215 A_BomoASG_c15111_g1_i1
257bp
FPKM:5.63 TPM:4.32
4216 A_BomoASG_c15112_g1_i1
361bp
 dedicator_of_cytokinesis_protein_3_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
FPKM:1.99 TPM:1.53
4217 A_BomoASG_c15112_g2_i1
620bp
 dedicator_of_cytokinesis_protein_3_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0017124 F SH3 domain binding
GO:0043547 P positive regulation of GTPase activity
FPKM:3.92 TPM:3.01
4218 A_BomoASG_c15115_g1_i1
488bp
FPKM:3.53 TPM:2.71
4219 A_BomoASG_c15116_g1_i1
203bp
FPKM:29.19 TPM:22.39
4220 A_BomoASG_c15117_g1_i1
265bp
FPKM:0.00 TPM:0.00
4221 A_BomoASG_c15118_g1_i1
225bp
 uncharacterized_protein_LOC105841832_[Bombyx_mori]
FPKM:2.38 TPM:1.83
4222 A_BomoASG_c15119_g1_i1
523bp
FPKM:7.83 TPM:6.01
4223 A_BomoASG_c1511_g1_i1
228bp
FPKM:0.76 TPM:0.59
4224 A_BomoASG_c15121_g1_i1
267bp
FPKM:3.61 TPM:2.77
4225 A_BomoASG_c15122_g1_i1
239bp
 putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:1.35 TPM:1.03
4226 A_BomoASG_c15122_g2_i1
290bp
 putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
FPKM:2.59 TPM:1.98
4227 A_BomoASG_c15122_g3_i1
380bp
 putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0005313 F L-glutamate transmembrane transporter activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006836 P neurotransmitter transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0050803 P regulation of synapse structure or activity
GO:0050957 P equilibrioception
GO:0055085 P transmembrane transport
GO:0060005 P vestibular reflex
GO:0089711 P L-glutamate transmembrane transport
FPKM:2.61 TPM:2.00
4228 A_BomoASG_c15123_g1_i1
384bp
FPKM:2.56 TPM:1.96
4229 A_BomoASG_c15124_g1_i1
447bp
FPKM:2.62 TPM:2.01
4230 A_BomoASG_c15125_g1_i1
365bp
FPKM:3.07 TPM:2.35
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