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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4171 A_BomoASG_c15062_g1_i1
313bp
FPKM:1.85 TPM:1.42
4172 A_BomoASG_c15063_g1_i1
527bp
FPKM:1.90 TPM:1.46
4173 A_BomoASG_c15065_g1_i1
1595bp
 glycylpeptide_N-tetradecanoyltransferase_2_[Bombyx_mori]
GO:0004379 F glycylpeptide N-tetradecanoyltransferase activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006499 P N-terminal protein myristoylation
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018008 P N-terminal peptidyl-glycine N-myristoylation
GO:0019898 C extrinsic component of membrane
GO:0022400 P regulation of rhodopsin mediated signaling pathway
GO:0075733 P intracellular transport of virus
FPKM:44.01 TPM:33.76
4174 A_BomoASG_c15066_g1_i1
528bp
FPKM:1.89 TPM:1.45
4175 A_BomoASG_c15068_g1_i1
517bp
FPKM:2.11 TPM:1.62
4176 A_BomoASG_c15069_g1_i1
205bp
FPKM:1.05 TPM:0.80
4177 A_BomoASG_c15070_g1_i1
228bp
FPKM:7.65 TPM:5.86
4178 A_BomoASG_c15071_g1_i1
301bp
FPKM:5.59 TPM:4.28
4179 A_BomoASG_c15072_g1_i1
219bp
FPKM:0.00 TPM:0.00
4180 A_BomoASG_c15074_g1_i1
1123bp
FPKM:4.09 TPM:3.14
4181 A_BomoASG_c15076_g1_i1
495bp
 nitric_oxide-associated_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006915 P apoptotic process
GO:0010941 P regulation of cell death
GO:0016020 C membrane
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032543 P mitochondrial translation
GO:0042254 P ribosome biogenesis
GO:0043457 P regulation of cellular respiration
GO:0044822 F RNA binding
FPKM:3.98 TPM:3.05
4182 A_BomoASG_c15077_g1_i1
496bp
 LOW_QUALITY_PROTEIN:_toll-like_receptor_6_[Bombyx_mori]
FPKM:4.48 TPM:3.44
4183 A_BomoASG_c15079_g1_i1
369bp
FPKM:7.12 TPM:5.46
4184 A_BomoASG_c1507_g1_i1
437bp
 atf2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0003151 P outflow tract morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006970 P response to osmotic stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0008134 F transcription factor binding
GO:0008140 F cAMP response element binding protein binding
GO:0009414 P response to water deprivation
GO:0016020 C membrane
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0032915 P positive regulation of transforming growth factor beta2 production
GO:0035497 F cAMP response element binding
GO:0035861 C site of double-strand break
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045444 P fat cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060612 P adipose tissue development
GO:0097186 P amelogenesis
GO:1902110 P positive regulation of mitochondrial membrane permeability involved in apoptotic process
FPKM:3.75 TPM:2.88
4185 A_BomoASG_c15081_g1_i1
260bp
FPKM:2.74 TPM:2.10
4186 A_BomoASG_c15082_g1_i1
363bp
FPKM:0.85 TPM:0.65
4187 A_BomoASG_c15083_g1_i1
404bp
FPKM:2.36 TPM:1.81
4188 A_BomoASG_c15084_g1_i1
434bp
FPKM:6.32 TPM:4.84
4189 A_BomoASG_c15085_g1_i1
532bp
FPKM:2.50 TPM:1.91
4190 A_BomoASG_c15086_g1_i1
349bp
FPKM:2.41 TPM:1.85
4191 A_BomoASG_c15087_g1_i1
666bp
FPKM:1.38 TPM:1.06
4192 A_BomoASG_c15088_g1_i1
485bp
 ribosomal_protein_S15A_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1992.63 TPM:1528.43
4193 A_BomoASG_c15088_g2_i1
920bp
 putative_SERF-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0008150 P biological_process
FPKM:134.37 TPM:103.07
4194 A_BomoASG_c15089_g1_i1
286bp
FPKM:10.20 TPM:7.83
4195 A_BomoASG_c1508_g1_i1
203bp
FPKM:11.89 TPM:9.12
4196 A_BomoASG_c15090_g1_i1
292bp
 PREDICTED:_uncharacterized_protein_LOC106123604_[Papilio_xuthus]
FPKM:5.10 TPM:3.91
4197 A_BomoASG_c15091_g1_i1
680bp
FPKM:2.69 TPM:2.07
4198 A_BomoASG_c15093_g1_i1
625bp
 mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:8.14 TPM:6.24
4199 A_BomoASG_c15094_g1_i1
456bp
FPKM:4.68 TPM:3.59
4200 A_BomoASG_c15094_g2_i1
224bp
FPKM:0.80 TPM:0.62
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