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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4051 A_BomoASG_c14941_g1_i2
308bp
FPKM:28.10 TPM:21.55
4052 A_BomoASG_c14942_g1_i1
372bp
FPKM:6.21 TPM:4.77
4053 A_BomoASG_c14943_g1_i1
205bp
FPKM:0.00 TPM:0.00
4054 A_BomoASG_c14943_g1_i2
448bp
 synaptic_vesicle_2-related_protein_[Bombyx_mori]
GO:0006810 P transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
FPKM:2.41 TPM:1.85
4055 A_BomoASG_c14945_g1_i1
730bp
 vacuolar_protein_sorting_26_[Bombyx_mori]
FPKM:2.77 TPM:2.12
4056 A_BomoASG_c14946_g1_i1
269bp
 signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0031901 C early endosome membrane
GO:0033565 C ESCRT-0 complex
GO:0036258 P multivesicular body assembly
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043231 C intracellular membrane-bounded organelle
FPKM:11.73 TPM:9.00
4057 A_BomoASG_c14946_g1_i2
474bp
 signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
FPKM:43.46 TPM:33.33
4058 A_BomoASG_c14948_g1_i1
633bp
 sid-1-like_protein2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
FPKM:2.14 TPM:1.64
4059 A_BomoASG_c14948_g1_i2
512bp
 LOW_QUALITY_PROTEIN:_SID1_transmembrane_family_member_1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
FPKM:0.60 TPM:0.46
4060 A_BomoASG_c14949_g1_i1
222bp
FPKM:10.71 TPM:8.21
4061 A_BomoASG_c1494_g1_i1
287bp
 uncharacterized_protein_LOC101736053_[Bombyx_mori]
FPKM:1.76 TPM:1.35
4062 A_BomoASG_c1494_g1_i2
663bp
 uncharacterized_protein_LOC101736053_[Bombyx_mori]
FPKM:2.68 TPM:2.05
4063 A_BomoASG_c14950_g1_i1
348bp
FPKM:5.46 TPM:4.19
4064 A_BomoASG_c14951_g1_i1
773bp
 receptor_expression_enhancing_protein_isoform_2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.00 TPM:0.00
4065 A_BomoASG_c14951_g1_i2
791bp
 receptor_expression_enhancing_protein_isoform_2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:98.05 TPM:75.21
4066 A_BomoASG_c14951_g1_i3
899bp
 receptor_expression_enhancing_protein_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:24.65 TPM:18.91
4067 A_BomoASG_c14952_g1_i1
617bp
 guanylate_cyclase_32E_[Bombyx_mori]
FPKM:20.64 TPM:15.83
4068 A_BomoASG_c14955_g1_i1
796bp
FPKM:6.16 TPM:4.72
4069 A_BomoASG_c14956_g1_i1
329bp
 uncharacterized_protein_LOC101740452_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000186 P obsolete activation of MAPKK activity
GO:0000187 P obsolete activation of MAPK activity
GO:0001702 P gastrulation with mouth forming second
GO:0001759 P organ induction
GO:0002088 P lens development in camera-type eye
GO:0003281 P ventricular septum development
GO:0005068 F transmembrane receptor protein tyrosine kinase adaptor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005104 F fibroblast growth factor receptor binding
GO:0005158 F insulin receptor binding
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007185 P transmembrane receptor protein tyrosine phosphatase signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007405 P neuroblast proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0012505 C endomembrane system
GO:0014066 P regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0019211 F phosphatase activator activity
GO:0030900 P forebrain development
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042981 P regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0046619 P lens placode formation involved in camera-type eye formation
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046934 F phosphatidylinositol-4,5-bisphosphate 3-kinase activity
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050678 P regulation of epithelial cell proliferation
GO:0060527 P prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis
GO:0070307 P lens fiber cell development
GO:0070372 P regulation of ERK1 and ERK2 cascade
FPKM:8.40 TPM:6.44
4070 A_BomoASG_c14957_g1_i1
983bp
 surfeit_locus_protein_6_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007419 P ventral cord development
GO:0022008 P neurogenesis
GO:0042254 P ribosome biogenesis
FPKM:32.70 TPM:25.08
4071 A_BomoASG_c14957_g1_i2
293bp
 surfeit_locus_protein_6_homolog_[Bombyx_mori]
FPKM:4.11 TPM:3.16
4072 A_BomoASG_c14958_g1_i1
345bp
FPKM:3.08 TPM:2.36
4073 A_BomoASG_c14959_g1_i1
718bp
 rotamase_Pin1_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
FPKM:55.35 TPM:42.45
4074 A_BomoASG_c14959_g2_i1
360bp
FPKM:4.57 TPM:3.51
4075 A_BomoASG_c1495_g1_i1
258bp
FPKM:3.35 TPM:2.57
4076 A_BomoASG_c14960_g1_i1
231bp
FPKM:2.95 TPM:2.26
4077 A_BomoASG_c14962_g1_i1
892bp
 uncharacterized_protein_LOC101740194_[Bombyx_mori]
FPKM:54.09 TPM:41.49
4078 A_BomoASG_c14962_g1_i2
1482bp
 uncharacterized_protein_LOC101740194_[Bombyx_mori]
FPKM:3.72 TPM:2.85
4079 A_BomoASG_c14963_g1_i1
1259bp
 charged_multivesicular_body_protein_5_[Bombyx_mori]
GO:0000815 C ESCRT III complex
GO:0003674 F molecular_function
GO:0005768 C endosome
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0007293 P germarium-derived egg chamber formation
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030713 P ovarian follicle cell stalk formation
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0045807 P positive regulation of endocytosis
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060429 P epithelium development
FPKM:45.31 TPM:34.75
4080 A_BomoASG_c14965_g1_i1
639bp
FPKM:0.00 TPM:0.00
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