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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4021 A_BomoASG_c14915_g1_i1
572bp
 uncharacterized_protein_LOC105842407_[Bombyx_mori]
FPKM:1.83 TPM:1.41
4022 A_BomoASG_c14916_g1_i1
226bp
FPKM:6.27 TPM:4.81
4023 A_BomoASG_c14917_g1_i1
1455bp
 nascent_polypeptide_associated_complex_protein_alpha_subunit_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005854 C nascent polypeptide-associated complex
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0015031 P protein transport
GO:0022008 P neurogenesis
GO:0048477 P oogenesis
FPKM:44.50 TPM:34.13
4024 A_BomoASG_c14917_g1_i2
1492bp
 nascent_polypeptide_associated_complex_protein_alpha_subunit_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005854 C nascent polypeptide-associated complex
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0015031 P protein transport
GO:0022008 P neurogenesis
GO:0048477 P oogenesis
FPKM:190.81 TPM:146.36
4025 A_BomoASG_c14920_g1_i1
448bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.60 TPM:1.23
4026 A_BomoASG_c14921_g1_i1
871bp
 vacuolar_ATP_synthase_subunit_G_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016471 C vacuolar proton-transporting V-type ATPase complex
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1118.43 TPM:857.88
4027 A_BomoASG_c14922_g1_i1
205bp
 RNA_exonuclease_4_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4028 A_BomoASG_c14922_g1_i2
388bp
 RNA_exonuclease_4_[Bombyx_mori]
FPKM:2.52 TPM:1.93
4029 A_BomoASG_c14922_g1_i3
204bp
 RNA_exonuclease_4_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4030 A_BomoASG_c14923_g1_i1
1170bp
 WD40_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0019233 P sensory perception of pain
GO:0035097 C histone methyltransferase complex
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
FPKM:29.39 TPM:22.54
4031 A_BomoASG_c14924_g1_i1
258bp
 centromere_protein_I_[Bombyx_mori]
FPKM:3.91 TPM:3.00
4032 A_BomoASG_c14925_g1_i1
4932bp
 protein_piccolo_[Bombyx_mori]
FPKM:149.16 TPM:114.41
4033 A_BomoASG_c14925_g1_i2
5299bp
 protein_piccolo_[Bombyx_mori]
FPKM:167.39 TPM:128.40
4034 A_BomoASG_c14926_g1_i1
422bp
FPKM:3.96 TPM:3.04
4035 A_BomoASG_c14927_g1_i1
469bp
FPKM:1.68 TPM:1.29
4036 A_BomoASG_c14928_g1_i1
543bp
 SLIT-ROBO_Rho_GTPase-activating_protein_3-like,_partial_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030336 P negative regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0044327 C dendritic spine head
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045335 C phagocytic vesicle
GO:0046847 P filopodium assembly
GO:0048365 F small GTPase binding
GO:0048812 P neuron projection morphogenesis
GO:0051014 P actin filament severing
GO:0060996 P dendritic spine development
GO:2001223 P negative regulation of neuron migration
FPKM:3.18 TPM:2.44
4037 A_BomoASG_c14928_g1_i2
332bp
 SLIT-ROBO_Rho_GTPase-activating_protein_3-like,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4038 A_BomoASG_c14929_g1_i1
1838bp
 mitochondrial_enolase_superfamily_member_1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0009063 P cellular amino acid catabolic process
GO:0016829 F lyase activity
GO:0016853 F isomerase activity
GO:0044275 P cellular carbohydrate catabolic process
GO:0046872 F metal ion binding
GO:0050023 F L-fuconate dehydratase activity
FPKM:3634.04 TPM:2787.45
4039 A_BomoASG_c14930_g1_i1
219bp
 fatty_acyl-CoA_reductase_10,_partial_[Helicoverpa_assulta]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:2.57 TPM:1.97
4040 A_BomoASG_c14931_g1_i1
1742bp
 LOW_QUALITY_PROTEIN:_actin-binding_LIM_protein_2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007010 P cytoskeleton organization
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0009887 P animal organ morphogenesis
GO:0015629 C actin cytoskeleton
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0042384 P cilium assembly
GO:0046872 F metal ion binding
FPKM:5.70 TPM:4.37
4041 A_BomoASG_c14931_g1_i2
2496bp
 LOW_QUALITY_PROTEIN:_actin-binding_LIM_protein_2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007010 P cytoskeleton organization
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0009887 P animal organ morphogenesis
GO:0015629 C actin cytoskeleton
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0042384 P cilium assembly
GO:0046872 F metal ion binding
FPKM:24.17 TPM:18.54
4042 A_BomoASG_c14933_g1_i1
417bp
FPKM:9.41 TPM:7.22
4043 A_BomoASG_c14934_g1_i1
694bp
 putative_VPS9-ankyrin_repeat-containing_protein_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030133 C transport vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035544 P negative regulation of SNARE complex assembly
GO:0035646 P endosome to melanosome transport
GO:0042470 C melanosome
GO:0043005 C neuron projection
GO:0043547 P positive regulation of GTPase activity
GO:0045022 P early endosome to late endosome transport
GO:0048812 P neuron projection morphogenesis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0097422 C tubular endosome
GO:1990126 P endocytic recycling
FPKM:2.51 TPM:1.93
4044 A_BomoASG_c14935_g1_i1
378bp
FPKM:3.42 TPM:2.62
4045 A_BomoASG_c14936_g1_i1
1429bp
 ATP-dependent_(S)-NAD(P)H-hydrate_dehydratase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0047453 F ATP-dependent NAD(P)H-hydrate dehydratase activity
GO:0052855 F ADP-dependent NAD(P)H-hydrate dehydratase activity
FPKM:36.03 TPM:27.63
4046 A_BomoASG_c14937_g1_i1
718bp
 protein_patched_[Bombyx_mori]
FPKM:18.94 TPM:14.53
4047 A_BomoASG_c14938_g1_i1
961bp
 protein_zwilch_[Bombyx_mori]
FPKM:1.24 TPM:0.95
4048 A_BomoASG_c14939_g1_i1
643bp
 thyroid_adenoma-associated_protein_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.81 TPM:1.39
4049 A_BomoASG_c14940_g1_i1
303bp
 uncharacterized_protein_LOC110385386_[Bombyx_mori]
FPKM:3.94 TPM:3.02
4050 A_BomoASG_c14941_g1_i1
363bp
FPKM:172.79 TPM:132.54
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