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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3811 A_BomoASG_c14693_g1_i1
331bp
FPKM:1.66 TPM:1.27
3812 A_BomoASG_c14694_g1_i1
439bp
 uncharacterized_protein_LOC101741926_[Bombyx_mori]
FPKM:2.63 TPM:2.02
3813 A_BomoASG_c14694_g1_i2
204bp
 uncharacterized_protein_LOC101741926_[Bombyx_mori]
FPKM:1.37 TPM:1.05
3814 A_BomoASG_c14695_g1_i1
600bp
FPKM:3.25 TPM:2.49
3815 A_BomoASG_c14695_g1_i2
225bp
FPKM:2.73 TPM:2.09
3816 A_BomoASG_c14695_g1_i3
299bp
FPKM:0.00 TPM:0.00
3817 A_BomoASG_c14696_g1_i1
637bp
FPKM:8.06 TPM:6.18
3818 A_BomoASG_c14697_g1_i1
225bp
FPKM:7.93 TPM:6.08
3819 A_BomoASG_c14698_g1_i1
360bp
 ribosomal_protein_S6_kinase,_90_kDa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007165 P signal transduction
GO:0007417 P central nervous system development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0045992 P negative regulation of embryonic development
GO:0046872 F metal ion binding
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:2000381 P negative regulation of mesoderm development
FPKM:4.57 TPM:3.51
3820 A_BomoASG_c14699_g1_i1
492bp
 uncharacterized_protein_LOC110384368_[Helicoverpa_armigera]
FPKM:4.36 TPM:3.35
3821 A_BomoASG_c1469_g1_i1
616bp
 muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]
FPKM:2.43 TPM:1.86
3822 A_BomoASG_c146_g1_i1
236bp
FPKM:2.79 TPM:2.14
3823 A_BomoASG_c14700_g1_i1
345bp
 sterol_regulatory_element-binding_protein_cleavage-activating_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0032933 P SREBP signaling pathway
FPKM:4.31 TPM:3.31
3824 A_BomoASG_c14702_g1_i1
448bp
 ubiquitin_carboxyl-terminal_hydrolase_32_isoform_X2_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
FPKM:3.41 TPM:2.61
3825 A_BomoASG_c14703_g1_i1
246bp
 uncharacterized_protein_LOC101742849_[Bombyx_mori]
FPKM:2.51 TPM:1.92
3826 A_BomoASG_c14704_g1_i1
249bp
FPKM:4.87 TPM:3.73
3827 A_BomoASG_c14705_g1_i1
1848bp
 peptidyl-prolyl_cis-trans_isomerase_FKBP8_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0001708 P cell fate specification
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005528 F FK506 binding
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0006915 P apoptotic process
GO:0007224 P smoothened signaling pathway
GO:0008152 P metabolic process
GO:0009953 P dorsal/ventral pattern formation
GO:0010468 P regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016853 F isomerase activity
GO:0021904 P dorsal/ventral neural tube patterning
GO:0021915 P neural tube development
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030510 P regulation of BMP signaling pathway
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031966 C mitochondrial membrane
GO:0035264 P multicellular organism growth
GO:0035556 P intracellular signal transduction
GO:0042802 F identical protein binding
GO:0043010 P camera-type eye development
GO:0043066 P negative regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0061077 P chaperone-mediated protein folding
FPKM:65.74 TPM:50.43
3828 A_BomoASG_c14709_g1_i1
325bp
 Pol_protein_[Bombyx_mori]
FPKM:1.38 TPM:1.06
3829 A_BomoASG_c14710_g1_i1
268bp
FPKM:10.23 TPM:7.84
3830 A_BomoASG_c14712_g1_i1
248bp
FPKM:2.46 TPM:1.88
3831 A_BomoASG_c14714_g1_i1
564bp
FPKM:1.29 TPM:0.99
3832 A_BomoASG_c14715_g1_i1
544bp
FPKM:2.27 TPM:1.74
3833 A_BomoASG_c14720_g1_i1
268bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:8.69 TPM:6.67
3834 A_BomoASG_c14723_g1_i1
306bp
FPKM:1.55 TPM:1.19
3835 A_BomoASG_c14723_g1_i2
228bp
FPKM:0.00 TPM:0.00
3836 A_BomoASG_c14724_g1_i1
480bp
 LOW_QUALITY_PROTEIN:_tRNA_(uracil-5-)-methyltransferase_homolog_A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001510 P RNA methylation
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0008168 F methyltransferase activity
GO:0008173 F RNA methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
FPKM:1.28 TPM:0.98
3837 A_BomoASG_c14724_g1_i2
403bp
 LOW_QUALITY_PROTEIN:_tRNA_(uracil-5-)-methyltransferase_homolog_A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001510 P RNA methylation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0008168 F methyltransferase activity
GO:0008173 F RNA methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
FPKM:2.35 TPM:1.80
3838 A_BomoASG_c14725_g1_i1
829bp
FPKM:3.67 TPM:2.82
3839 A_BomoASG_c14727_g1_i1
268bp
FPKM:2.05 TPM:1.57
3840 A_BomoASG_c14729_g1_i1
244bp
FPKM:0.00 TPM:0.00
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