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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3781 A_BomoASG_c14664_g1_i1
586bp
FPKM:1.78 TPM:1.36
3782 A_BomoASG_c14665_g1_i1
224bp
FPKM:7.23 TPM:5.54
3783 A_BomoASG_c14666_g1_i1
267bp
FPKM:0.52 TPM:0.40
3784 A_BomoASG_c14666_g2_i1
216bp
FPKM:8.03 TPM:6.16
3785 A_BomoASG_c14667_g1_i1
522bp
FPKM:1.44 TPM:1.11
3786 A_BomoASG_c14667_g1_i2
470bp
FPKM:0.00 TPM:0.00
3787 A_BomoASG_c14668_g1_i1
207bp
FPKM:1.02 TPM:0.78
3788 A_BomoASG_c14668_g1_i2
207bp
FPKM:0.00 TPM:0.00
3789 A_BomoASG_c14668_g2_i1
357bp
FPKM:0.29 TPM:0.22
3790 A_BomoASG_c14670_g1_i1
439bp
FPKM:4.34 TPM:3.33
3791 A_BomoASG_c14672_g1_i1
251bp
FPKM:1.79 TPM:1.37
3792 A_BomoASG_c14672_g2_i1
311bp
FPKM:1.87 TPM:1.43
3793 A_BomoASG_c14673_g1_i1
883bp
 NCK-interacting_protein_with_SH3_domain_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001784 F phosphotyrosine residue binding
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0008150 P biological_process
GO:0008360 P regulation of cell shape
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030335 P positive regulation of cell migration
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032587 C ruffle membrane
GO:0034987 F immunoglobulin receptor binding
GO:0034988 F Fc-gamma receptor I complex binding
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0042995 C cell projection
GO:0043306 P positive regulation of mast cell degranulation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0045859 P regulation of protein kinase activity
GO:0046777 P protein autophosphorylation
GO:0050715 P positive regulation of cytokine production
GO:0050764 P regulation of phagocytosis
GO:0050830 P defense response to Gram-positive bacterium
GO:0070062 C extracellular exosome
FPKM:1.70 TPM:1.30
3794 A_BomoASG_c14673_g1_i2
774bp
 NCK-interacting_protein_with_SH3_domain_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006099 P tricarboxylic acid cycle
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019233 P sensory perception of pain
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036335 P intestinal stem cell homeostasis
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042742 P defense response to bacterium
GO:0043277 P apoptotic cell clearance
GO:0045087 P innate immune response
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046529 P imaginal disc fusion, thorax closure
GO:0048749 P compound eye development
GO:0051017 P actin filament bundle assembly
GO:0090136 P epithelial cell-cell adhesion
FPKM:0.00 TPM:0.00
3795 A_BomoASG_c14674_g1_i1
277bp
 uncharacterized_protein_LOC101739791_isoform_X4_[Bombyx_mori]
FPKM:1.43 TPM:1.09
3796 A_BomoASG_c14675_g1_i1
229bp
FPKM:11.36 TPM:8.71
3797 A_BomoASG_c14678_g1_i1
220bp
FPKM:0.00 TPM:0.00
3798 A_BomoASG_c14678_g1_i2
270bp
FPKM:2.01 TPM:1.54
3799 A_BomoASG_c14679_g1_i1
208bp
hypothetical_protein_POVWA1_073990_[Plasmodium_ovale_wallikeri]
FPKM:2.00 TPM:1.53
3800 A_BomoASG_c1467_g1_i1
218bp
 transposase,_partial_[Cadra_cautella]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:1.74 TPM:1.33
3801 A_BomoASG_c14681_g1_i1
343bp
 integrator_complex_subunit_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
FPKM:19.31 TPM:14.81
3802 A_BomoASG_c14682_g1_i1
639bp
 glutamate_receptor-interacting_protein_2_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0008022 F protein C-terminus binding
GO:0008104 P protein localization
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016358 P dendrite development
GO:0030054 C cell junction
GO:0030159 F signaling receptor complex adaptor activity
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0035259 F glucocorticoid receptor binding
GO:0043005 C neuron projection
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0055037 C recycling endosome
FPKM:1.82 TPM:1.40
3803 A_BomoASG_c14683_g1_i1
458bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:8.14 TPM:6.25
3804 A_BomoASG_c14684_g1_i1
721bp
 gamma-glutamylcyclotransferase-like_[Bombyx_mori]
GO:0001836 P release of cytochrome c from mitochondria
GO:0003839 F gamma-glutamylcyclotransferase activity
GO:0005829 C cytosol
GO:0006750 P glutathione biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0042803 F protein homodimerization activity
FPKM:3.75 TPM:2.87
3805 A_BomoASG_c14685_g1_i1
344bp
FPKM:2.17 TPM:1.66
3806 A_BomoASG_c14686_g1_i1
213bp
 cytochrome_P450,_partial_[Bombyx_mori]
FPKM:1.86 TPM:1.43
3807 A_BomoASG_c14687_g1_i1
217bp
FPKM:6.16 TPM:4.72
3808 A_BomoASG_c14688_g1_i1
663bp
FPKM:1.39 TPM:1.07
3809 A_BomoASG_c1468_g1_i1
311bp
FPKM:3.74 TPM:2.87
3810 A_BomoASG_c14690_g1_i1
411bp
 NF-X1-type_zinc_finger_protein_NFXL1_[Bombyx_mori]
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
FPKM:3.21 TPM:2.46
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