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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3571 A_BomoASG_c14440_g1_i1
325bp
FPKM:6.88 TPM:5.28
3572 A_BomoASG_c14444_g1_i1
654bp
 midasin_isoform_X1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
FPKM:1.77 TPM:1.36
3573 A_BomoASG_c14445_g1_i1
614bp
 uncharacterized_protein_LOC110385835_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.41 TPM:1.08
3574 A_BomoASG_c14446_g1_i1
551bp
FPKM:3.42 TPM:2.62
3575 A_BomoASG_c14448_g1_i1
281bp
FPKM:2.30 TPM:1.77
3576 A_BomoASG_c14449_g1_i1
231bp
FPKM:4.43 TPM:3.40
3577 A_BomoASG_c14450_g1_i1
473bp
 LOW_QUALITY_PROTEIN:_ATPase_WRNIP1_[Bombyx_mori]
FPKM:4.44 TPM:3.40
3578 A_BomoASG_c14451_g1_i1
227bp
 hypothetical_protein_RR48_05189_[Papilio_machaon]
FPKM:0.00 TPM:0.00
3579 A_BomoASG_c14451_g1_i2
249bp
 hypothetical_protein_RR48_05189_[Papilio_machaon]
FPKM:3.65 TPM:2.80
3580 A_BomoASG_c14452_g1_i1
424bp
FPKM:2.84 TPM:2.18
3581 A_BomoASG_c14454_g1_i1
480bp
FPKM:2.35 TPM:1.80
3582 A_BomoASG_c14455_g1_i1
259bp
FPKM:12.17 TPM:9.34
3583 A_BomoASG_c14458_g1_i1
244bp
FPKM:4.48 TPM:3.43
3584 A_BomoASG_c14459_g1_i1
360bp
FPKM:6.57 TPM:5.04
3585 A_BomoASG_c1445_g1_i1
381bp
FPKM:2.34 TPM:1.79
3586 A_BomoASG_c14460_g1_i1
1468bp
FPKM:31.77 TPM:24.37
3587 A_BomoASG_c14460_g1_i2
1676bp
FPKM:1.71 TPM:1.31
3588 A_BomoASG_c14461_g1_i1
415bp
 actin,_partial_[Acyrthosiphon_pisum]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
FPKM:2.03 TPM:1.56
3589 A_BomoASG_c14462_g1_i1
280bp
 PREDICTED:_uncharacterized_protein_LOC106137322_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.86 TPM:1.42
3590 A_BomoASG_c14463_g1_i1
581bp
FPKM:4.42 TPM:3.39
3591 A_BomoASG_c14464_g1_i1
714bp
 sedoheptulokinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0009052 P pentose-phosphate shunt, non-oxidative branch
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0035963 P cellular response to interleukin-13
GO:0043030 P regulation of macrophage activation
GO:0050277 F sedoheptulokinase activity
GO:0050727 P regulation of inflammatory response
GO:0071222 P cellular response to lipopolysaccharide
GO:0071353 P cellular response to interleukin-4
FPKM:4.53 TPM:3.48
3592 A_BomoASG_c14464_g2_i1
377bp
FPKM:3.43 TPM:2.63
3593 A_BomoASG_c14466_g1_i1
267bp
 G_protein-activated_inward_rectifier_potassium_channel_3_isoform_X3_[Bombyx_mori]
FPKM:3.09 TPM:2.37
3594 A_BomoASG_c14468_g1_i1
918bp
 uncharacterized_protein_LOC105843009_[Bombyx_mori]
FPKM:2.78 TPM:2.13
3595 A_BomoASG_c14469_g1_i1
263bp
FPKM:3.20 TPM:2.46
3596 A_BomoASG_c14469_g2_i1
483bp
FPKM:2.33 TPM:1.79
3597 A_BomoASG_c1446_g1_i1
356bp
FPKM:1.46 TPM:1.12
3598 A_BomoASG_c14470_g1_i1
415bp
FPKM:2.26 TPM:1.73
3599 A_BomoASG_c14472_g1_i1
440bp
FPKM:2.47 TPM:1.90
3600 A_BomoASG_c14475_g1_i1
392bp
FPKM:6.44 TPM:4.94
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