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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3541 A_BomoASG_c14413_g1_i1
247bp
 uncharacterized_protein_LOC101738225_isoform_X1_[Bombyx_mori]
FPKM:1.86 TPM:1.43
3542 A_BomoASG_c14414_g1_i1
310bp
FPKM:6.40 TPM:4.91
3543 A_BomoASG_c14415_g1_i1
248bp
FPKM:1.23 TPM:0.94
3544 A_BomoASG_c14415_g2_i1
208bp
 uncharacterized_protein_LOC101736660_isoform_X1_[Bombyx_mori]
FPKM:5.00 TPM:3.84
3545 A_BomoASG_c14416_g1_i1
388bp
FPKM:8.31 TPM:6.37
3546 A_BomoASG_c14417_g1_i1
247bp
FPKM:4.34 TPM:3.33
3547 A_BomoASG_c14418_g1_i1
298bp
FPKM:3.67 TPM:2.81
3548 A_BomoASG_c1441_g1_i1
262bp
FPKM:2.15 TPM:1.65
3549 A_BomoASG_c14420_g1_i1
915bp
 ubiquitin-protein_ligase_E3C_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
FPKM:4.73 TPM:3.63
3550 A_BomoASG_c14421_g1_i1
1670bp
 ubiquitin_conjugating_enzyme_E2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070936 P protein K48-linked ubiquitination
FPKM:59.94 TPM:45.98
3551 A_BomoASG_c14422_g1_i1
454bp
FPKM:5.31 TPM:4.07
3552 A_BomoASG_c14424_g1_i1
361bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0005452 F inorganic anion exchanger activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015347 F sodium-independent organic anion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0043252 P sodium-independent organic anion transport
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
FPKM:3.13 TPM:2.40
3553 A_BomoASG_c14425_g1_i1
264bp
FPKM:1.66 TPM:1.27
3554 A_BomoASG_c14427_g1_i1
863bp
FPKM:4.08 TPM:3.13
3555 A_BomoASG_c14428_g1_i1
274bp
FPKM:4.87 TPM:3.73
3556 A_BomoASG_c14429_g1_i1
561bp
FPKM:3.62 TPM:2.78
3557 A_BomoASG_c1442_g1_i1
347bp
FPKM:1.22 TPM:0.94
3558 A_BomoASG_c1442_g2_i1
279bp
FPKM:1.40 TPM:1.08
3559 A_BomoASG_c14430_g1_i1
208bp
FPKM:7.00 TPM:5.37
3560 A_BomoASG_c14431_g1_i1
380bp
 uncharacterized_protein_LOC101743769_isoform_X1_[Bombyx_mori]
FPKM:1.30 TPM:1.00
3561 A_BomoASG_c14432_g1_i1
592bp
FPKM:2.83 TPM:2.17
3562 A_BomoASG_c14433_g1_i1
529bp
FPKM:28.95 TPM:22.21
3563 A_BomoASG_c14434_g1_i1
983bp
FPKM:2.99 TPM:2.29
3564 A_BomoASG_c14435_g1_i1
260bp
FPKM:6.27 TPM:4.81
3565 A_BomoASG_c14435_g1_i2
408bp
FPKM:2.91 TPM:2.23
3566 A_BomoASG_c14436_g1_i1
286bp
FPKM:0.44 TPM:0.34
3567 A_BomoASG_c14437_g1_i1
492bp
FPKM:2.44 TPM:1.87
3568 A_BomoASG_c14438_g1_i1
465bp
FPKM:5.69 TPM:4.36
3569 A_BomoASG_c14439_g1_i1
414bp
FPKM:1.36 TPM:1.04
3570 A_BomoASG_c1443_g1_i1
320bp
 semaphorin-1A_isoform_X1_[Bombyx_mori]
GO:0001755 P neural crest cell migration
GO:0001964 P startle response
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007416 P synapse assembly
GO:0008039 P synaptic target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016199 P axon midline choice point recognition
GO:0030154 P cell differentiation
GO:0030215 F semaphorin receptor binding
GO:0030335 P positive regulation of cell migration
GO:0031987 P locomotion involved in locomotory behavior
GO:0045499 F chemorepellent activity
GO:0045792 P negative regulation of cell size
GO:0048813 P dendrite morphogenesis
GO:0048843 P negative regulation of axon extension involved in axon guidance
GO:0048854 P brain morphogenesis
GO:0050919 P negative chemotaxis
GO:2000305 P semaphorin-plexin signaling pathway involved in regulation of photoreceptor cell axon guidance
FPKM:2.12 TPM:1.63
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