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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3271 A_BomoASG_c14128_g1_i1
218bp
FPKM:3.47 TPM:2.66
3272 A_BomoASG_c1412_g1_i1
536bp
FPKM:2.01 TPM:1.54
3273 A_BomoASG_c14130_g1_i1
301bp
FPKM:1.60 TPM:1.22
3274 A_BomoASG_c14132_g1_i1
306bp
FPKM:3.86 TPM:2.96
3275 A_BomoASG_c14135_g1_i1
207bp
 uncharacterized_protein_LOC105842659_[Bombyx_mori]
FPKM:2.03 TPM:1.56
3276 A_BomoASG_c14136_g1_i1
594bp
FPKM:4.96 TPM:3.80
3277 A_BomoASG_c14139_g1_i1
593bp
 pol_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.76 TPM:2.89
3278 A_BomoASG_c1413_g1_i1
326bp
FPKM:1.37 TPM:1.05
3279 A_BomoASG_c14143_g1_i1
406bp
FPKM:2.10 TPM:1.61
3280 A_BomoASG_c14144_g1_i1
562bp
 putative_pol_protein_[Danaus_plexippus_plexippus]
FPKM:1.30 TPM:1.00
3281 A_BomoASG_c14145_g1_i1
219bp
FPKM:5.14 TPM:3.94
3282 A_BomoASG_c14147_g1_i1
371bp
 myosin-I_heavy_chain_isoform_X1_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0001726 C ruffle
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0007165 P signal transduction
GO:0007266 P Rho protein signal transduction
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016459 C myosin complex
GO:0016887 F ATP hydrolysis activity
GO:0030027 C lamellipodium
GO:0030048 P actin filament-based movement
GO:0030898 F microfilament motor activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0035385 P Roundabout signaling pathway
GO:0035556 P intracellular signal transduction
GO:0043008 F ATP-dependent protein binding
GO:0043531 F ADP binding
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
FPKM:4.07 TPM:3.12
3283 A_BomoASG_c14147_g2_i1
201bp
 myosin-I_heavy_chain_isoform_X2_[Bombyx_mori]
FPKM:4.47 TPM:3.43
3284 A_BomoASG_c1414_g1_i1
240bp
FPKM:2.00 TPM:1.54
3285 A_BomoASG_c14151_g1_i1
929bp
 autophagy-related_protein_9A_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0034727 P piecemeal microautophagy of the nucleus
GO:0044805 P late nucleophagy
GO:0055037 C recycling endosome
FPKM:0.29 TPM:0.22
3286 A_BomoASG_c14151_g1_i2
1392bp
 autophagy-related_protein_9A_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0034727 P piecemeal microautophagy of the nucleus
GO:0044805 P late nucleophagy
GO:0055037 C recycling endosome
FPKM:2.49 TPM:1.91
3287 A_BomoASG_c14152_g1_i1
209bp
FPKM:2.96 TPM:2.27
3288 A_BomoASG_c14154_g1_i1
603bp
 cyclin_B_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
FPKM:0.92 TPM:0.71
3289 A_BomoASG_c14155_g1_i1
483bp
FPKM:1.97 TPM:1.51
3290 A_BomoASG_c14157_g1_i1
667bp
FPKM:5.18 TPM:3.97
3291 A_BomoASG_c14158_g1_i1
502bp
FPKM:1.51 TPM:1.16
3292 A_BomoASG_c14158_g1_i2
811bp
FPKM:1.72 TPM:1.32
3293 A_BomoASG_c1415_g1_i1
240bp
FPKM:3.34 TPM:2.56
3294 A_BomoASG_c14160_g1_i1
568bp
FPKM:5.56 TPM:4.26
3295 A_BomoASG_c14163_g1_i1
269bp
FPKM:2.03 TPM:1.56
3296 A_BomoASG_c14164_g1_i1
206bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3297 A_BomoASG_c14164_g1_i2
230bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.49 TPM:1.15
3298 A_BomoASG_c14165_g1_i1
377bp
FPKM:5.43 TPM:4.17
3299 A_BomoASG_c14166_g1_i1
247bp
 Uncharacterized_protein_APZ42_031051_[Daphnia_magna]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.48 TPM:1.90
3300 A_BomoASG_c14167_g1_i1
542bp
FPKM:5.78 TPM:4.43
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