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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3301 A_BomoASG_c14168_g1_i1
276bp
 uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005427 F proton-dependent oligopeptide secondary active transmembrane transporter activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006857 P oligopeptide transport
GO:0015031 P protein transport
GO:0015198 F oligopeptide transmembrane transporter activity
GO:0015833 P peptide transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035672 P oligopeptide transmembrane transport
FPKM:4.79 TPM:3.67
3302 A_BomoASG_c14169_g1_i1
379bp
 midasin_isoform_X1_[Bombyx_mori]
FPKM:1.75 TPM:1.34
3303 A_BomoASG_c14169_g1_i2
318bp
 midasin_isoform_X1_[Bombyx_mori]
FPKM:0.84 TPM:0.64
3304 A_BomoASG_c1416_g1_i1
253bp
 protein_tramtrack,_beta_isoform-like_isoform_X21_[Helicoverpa_armigera]
FPKM:1.17 TPM:0.90
3305 A_BomoASG_c14170_g1_i1
272bp
FPKM:23.25 TPM:17.83
3306 A_BomoASG_c14171_g1_i1
258bp
 guanine_nucleotide_binding_protein_[Bombyx_mori]
FPKM:1.67 TPM:1.28
3307 A_BomoASG_c14172_g1_i1
436bp
 hypothetical_protein_KGM_203558_[Danaus_plexippus_plexippus]
FPKM:1.88 TPM:1.44
3308 A_BomoASG_c14173_g1_i1
717bp
 PREDICTED:_Golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1_[Papilio_polytes]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005811 C lipid droplet
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:7.55 TPM:5.79
3309 A_BomoASG_c14174_g1_i1
379bp
FPKM:1.83 TPM:1.41
3310 A_BomoASG_c14175_g1_i1
252bp
FPKM:1.18 TPM:0.91
3311 A_BomoASG_c14177_g1_i1
1951bp
 uncharacterized_protein_LOC101739568_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:36.05 TPM:27.65
3312 A_BomoASG_c14178_g1_i1
581bp
FPKM:7.32 TPM:5.62
3313 A_BomoASG_c14179_g1_i1
260bp
FPKM:2.19 TPM:1.68
3314 A_BomoASG_c1417_g1_i1
236bp
FPKM:3.48 TPM:2.67
3315 A_BomoASG_c14181_g1_i1
340bp
 protein_enabled_isoform_X5_[Bombyx_mori]
GO:0003382 P epithelial cell morphogenesis
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007010 P cytoskeleton organization
GO:0007015 P actin filament organization
GO:0007298 P border follicle cell migration
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007390 P germ-band shortening
GO:0007391 P dorsal closure
GO:0007396 P suture of dorsal opening
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008258 P head involution
GO:0008360 P regulation of cell shape
GO:0010591 P regulation of lamellipodium assembly
GO:0017124 F SH3 domain binding
GO:0030027 C lamellipodium
GO:0030036 P actin cytoskeleton organization
GO:0030335 P positive regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031252 C cell leading edge
GO:0031346 P positive regulation of cell projection organization
GO:0032433 C filopodium tip
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035262 P gonad morphogenesis
GO:0042995 C cell projection
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0051489 P regulation of filopodium assembly
GO:0051491 P positive regulation of filopodium assembly
GO:0060288 P formation of a compartment boundary
GO:0071212 C subsynaptic reticulum
GO:1990255 P subsynaptic reticulum organization
FPKM:4.11 TPM:3.15
3316 A_BomoASG_c14182_g1_i1
253bp
FPKM:5.85 TPM:4.49
3317 A_BomoASG_c14183_g1_i1
450bp
FPKM:5.97 TPM:4.58
3318 A_BomoASG_c14184_g1_i1
234bp
FPKM:2.14 TPM:1.64
3319 A_BomoASG_c14185_g1_i1
339bp
FPKM:3.18 TPM:2.44
3320 A_BomoASG_c14185_g2_i1
572bp
FPKM:2.12 TPM:1.62
3321 A_BomoASG_c14189_g1_i1
250bp
 PREDICTED:_uncharacterized_protein_LOC106129795_[Amyelois_transitella]
FPKM:4.82 TPM:3.70
3322 A_BomoASG_c14190_g1_i1
249bp
FPKM:1.22 TPM:0.93
3323 A_BomoASG_c14191_g1_i1
293bp
FPKM:0.84 TPM:0.65
3324 A_BomoASG_c14192_g1_i1
335bp
FPKM:1.30 TPM:1.00
3325 A_BomoASG_c14193_g1_i1
261bp
 TATA-box-binding_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
FPKM:5.43 TPM:4.17
3326 A_BomoASG_c14194_g1_i1
445bp
FPKM:2.23 TPM:1.71
3327 A_BomoASG_c14196_g1_i1
292bp
FPKM:4.25 TPM:3.26
3328 A_BomoASG_c14197_g1_i1
230bp
FPKM:0.75 TPM:0.57
3329 A_BomoASG_c1419_g1_i1
250bp
 retinoblastoma-like_protein_2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0010629 P negative regulation of gene expression
GO:0016568 P chromatin organization
GO:0043550 P regulation of lipid kinase activity
GO:0051726 P regulation of cell cycle
GO:0070062 C extracellular exosome
GO:1990841 F promoter-specific chromatin binding
FPKM:1.81 TPM:1.39
3330 A_BomoASG_c141_g1_i1
742bp
 testis-expressed_protein_9_[Bombyx_mori]
FPKM:1.81 TPM:1.39
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