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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3241 A_BomoASG_c14093_g1_i2
311bp
FPKM:1.32 TPM:1.01
3242 A_BomoASG_c14094_g1_i1
434bp
FPKM:4.63 TPM:3.55
3243 A_BomoASG_c14095_g1_i1
668bp
FPKM:23.65 TPM:18.14
3244 A_BomoASG_c14097_g1_i1
236bp
FPKM:3.48 TPM:2.67
3245 A_BomoASG_c14098_g1_i1
623bp
FPKM:1.26 TPM:0.96
3246 A_BomoASG_c14099_g1_i1
230bp
 intraflagellar_transport_protein_122_homolog_[Bombyx_mori]
FPKM:3.39 TPM:2.60
3247 A_BomoASG_c14099_g1_i2
238bp
 intraflagellar_transport_protein_122_homolog_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007227 P signal transduction downstream of smoothened
GO:0007275 P multicellular organism development
GO:0009953 P dorsal/ventral pattern formation
GO:0010172 P embryonic body morphogenesis
GO:0016020 C membrane
GO:0021914 P negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0032391 C photoreceptor connecting cilium
GO:0035050 P embryonic heart tube development
GO:0035115 P embryonic forelimb morphogenesis
GO:0035720 P intraciliary anterograde transport
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0048593 P camera-type eye morphogenesis
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060173 P limb development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0072594 P establishment of protein localization to organelle
GO:0097546 C ciliary base
FPKM:2.35 TPM:1.81
3248 A_BomoASG_c1409_g1_i1
440bp
 Retrovirus-related_Pol_polyprotein_from_transposon_412-like_Protein_[Tribolium_castaneum]
FPKM:1.44 TPM:1.11
3249 A_BomoASG_c140_g1_i1
1800bp
 apyrase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0009166 P nucleotide catabolic process
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
FPKM:391.00 TPM:299.91
3250 A_BomoASG_c140_g1_i2
2017bp
 apyrase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0009166 P nucleotide catabolic process
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
FPKM:198.56 TPM:152.30
3251 A_BomoASG_c14100_g1_i1
463bp
FPKM:4.01 TPM:3.07
3252 A_BomoASG_c14103_g1_i1
302bp
FPKM:2.78 TPM:2.13
3253 A_BomoASG_c14104_g1_i1
259bp
FPKM:1.11 TPM:0.85
3254 A_BomoASG_c14105_g1_i1
924bp
FPKM:2.45 TPM:1.88
3255 A_BomoASG_c14108_g1_i1
225bp
FPKM:3.17 TPM:2.43
3256 A_BomoASG_c1410_g1_i1
315bp
 integrin_beta-nu_precursor_[Bombyx_mori]
GO:0005515 F protein binding
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008305 C integrin complex
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031430 C M band
GO:0032956 P regulation of actin cytoskeleton organization
GO:0040017 P positive regulation of locomotion
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045987 P positive regulation of smooth muscle contraction
GO:0055001 P muscle cell development
GO:0055120 C striated muscle dense body
GO:0060279 P positive regulation of ovulation
GO:1903356 P positive regulation of distal tip cell migration
GO:1904901 P positive regulation of myosin II filament organization
FPKM:2.92 TPM:2.24
3257 A_BomoASG_c14110_g1_i1
753bp
 Uncharacterized_protein_OBRU01_24605_[Operophtera_brumata]
FPKM:2.96 TPM:2.27
3258 A_BomoASG_c14110_g1_i2
536bp
 Uncharacterized_protein_OBRU01_24605_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
3259 A_BomoASG_c14114_g1_i1
398bp
FPKM:7.73 TPM:5.93
3260 A_BomoASG_c14115_g1_i1
224bp
FPKM:4.02 TPM:3.08
3261 A_BomoASG_c14116_g1_i1
217bp
FPKM:0.00 TPM:0.00
3262 A_BomoASG_c14116_g1_i2
711bp
 hypothetical_protein_KGM_209470_[Danaus_plexippus_plexippus]
FPKM:2.97 TPM:2.28
3263 A_BomoASG_c14117_g1_i1
416bp
FPKM:0.67 TPM:0.52
3264 A_BomoASG_c14118_g1_i1
1081bp
 adenylate_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006172 P ADP biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016776 F phosphotransferase activity, phosphate group as acceptor
GO:0019205 F nucleobase-containing compound kinase activity
GO:0046033 P AMP metabolic process
GO:0046034 P ATP metabolic process
GO:0046939 P nucleotide phosphorylation
FPKM:48.08 TPM:36.88
3265 A_BomoASG_c14120_g1_i1
364bp
 LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030198 P extracellular matrix organization
GO:0030414 F peptidase inhibitor activity
GO:0031012 C extracellular matrix
FPKM:1.40 TPM:1.08
3266 A_BomoASG_c14120_g2_i1
250bp
 LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
FPKM:2.41 TPM:1.85
3267 A_BomoASG_c14122_g1_i1
291bp
FPKM:4.28 TPM:3.28
3268 A_BomoASG_c14123_g1_i1
346bp
FPKM:2.15 TPM:1.65
3269 A_BomoASG_c14125_g1_i1
216bp
 protein_Lilipod_isoform_X1_[Bombyx_mori]
FPKM:3.57 TPM:2.74
3270 A_BomoASG_c14126_g1_i1
496bp
FPKM:1.90 TPM:1.45
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