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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3211 A_BomoASG_c14055_g2_i1
351bp
 ribosomal_protein_S8_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:4.18 TPM:3.21
3212 A_BomoASG_c14056_g1_i1
313bp
FPKM:3.33 TPM:2.55
3213 A_BomoASG_c14057_g1_i1
404bp
 xylulose_kinase_isoform_X2_[Bombyx_mori]
FPKM:2.83 TPM:2.17
3214 A_BomoASG_c14058_g1_i1
303bp
FPKM:4.73 TPM:3.63
3215 A_BomoASG_c14059_g1_i1
294bp
FPKM:2.09 TPM:1.61
3216 A_BomoASG_c14061_g1_i1
202bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.10 TPM:0.84
3217 A_BomoASG_c14062_g1_i1
202bp
FPKM:0.00 TPM:0.00
3218 A_BomoASG_c14062_g1_i2
470bp
FPKM:0.75 TPM:0.57
3219 A_BomoASG_c14063_g1_i1
329bp
 PREDICTED:_uncharacterized_protein_LOC106721395_[Papilio_machaon]
FPKM:2.69 TPM:2.06
3220 A_BomoASG_c14066_g1_i1
241bp
FPKM:2.64 TPM:2.03
3221 A_BomoASG_c14068_g1_i1
216bp
FPKM:8.92 TPM:6.84
3222 A_BomoASG_c1406_g1_i1
229bp
 pelota-like_protein_[Bombyx_mori]
GO:0000212 P meiotic spindle organization
GO:0001745 P compound eye morphogenesis
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007054 P spindle assembly involved in male meiosis I
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007140 P male meiotic nuclear division
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008315 P G2/MI transition of meiotic cell cycle
GO:0016787 F hydrolase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0046872 F metal ion binding
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048137 P spermatocyte division
GO:0048749 P compound eye development
GO:0051078 P meiotic nuclear membrane disassembly
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0070481 P nuclear-transcribed mRNA catabolic process, non-stop decay
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
GO:0071025 P RNA surveillance
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.02 TPM:2.32
3223 A_BomoASG_c14070_g1_i1
220bp
 cysteine_and_glycine-rich_protein_2_[Bombyx_mori]
FPKM:4.23 TPM:3.24
3224 A_BomoASG_c14071_g1_i1
462bp
 uncharacterized_protein_LOC101737848_[Bombyx_mori]
FPKM:8.23 TPM:6.31
3225 A_BomoASG_c14072_g1_i1
548bp
FPKM:3.44 TPM:2.64
3226 A_BomoASG_c14073_g1_i1
310bp
FPKM:2.64 TPM:2.02
3227 A_BomoASG_c14075_g1_i1
250bp
FPKM:1.81 TPM:1.39
3228 A_BomoASG_c14076_g1_i1
246bp
FPKM:5.01 TPM:3.84
3229 A_BomoASG_c14077_g1_i1
331bp
FPKM:3.66 TPM:2.80
3230 A_BomoASG_c14078_g1_i1
234bp
FPKM:2.14 TPM:1.64
3231 A_BomoASG_c14080_g1_i1
421bp
FPKM:1.55 TPM:1.19
3232 A_BomoASG_c14081_g1_i1
233bp
FPKM:3.60 TPM:2.76
3233 A_BomoASG_c14084_g1_i1
342bp
FPKM:4.55 TPM:3.49
3234 A_BomoASG_c14084_g1_i2
595bp
FPKM:1.53 TPM:1.18
3235 A_BomoASG_c14086_g1_i1
1205bp
 LOW_QUALITY_PROTEIN:_UPF0160_protein_C27H6.8_[Bombyx_mori]
FPKM:18.93 TPM:14.52
3236 A_BomoASG_c1408_g1_i1
217bp
FPKM:3.52 TPM:2.70
3237 A_BomoASG_c14091_g1_i1
379bp
 acetylglucosaminyltransferase_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001701 P in utero embryonic development
GO:0003827 F alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0006049 P UDP-N-acetylglucosamine catabolic process
GO:0006486 P protein glycosylation
GO:0008375 F acetylglucosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
FPKM:3.93 TPM:3.01
3238 A_BomoASG_c14092_g1_i1
530bp
 surfeit_5_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:6.06 TPM:4.65
3239 A_BomoASG_c14092_g1_i2
644bp
 surfeit_5_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:20.51 TPM:15.73
3240 A_BomoASG_c14093_g1_i1
379bp
FPKM:1.17 TPM:0.90
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