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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2791 A_BomoASG_c13581_g1_i1
235bp
Uncharacterised_protein_[Mycobacterium_tuberculosis]
FPKM:2.11 TPM:1.62
2792 A_BomoASG_c13582_g1_i1
205bp
FPKM:6.28 TPM:4.82
2793 A_BomoASG_c13583_g1_i1
608bp
 alpha-esterase_45_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:2.73 TPM:2.09
2794 A_BomoASG_c13584_g1_i1
207bp
FPKM:3.05 TPM:2.34
2795 A_BomoASG_c13585_g1_i1
214bp
FPKM:3.67 TPM:2.81
2796 A_BomoASG_c13586_g1_i1
1314bp
 transforming_acidic_coiled-coil-containing_protein_3_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0001666 P response to hypoxia
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008283 P cell population proliferation
GO:0019904 F protein domain specific binding
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0022027 P interkinetic nuclear migration
GO:0030097 P hemopoiesis
GO:0030953 P astral microtubule organization
GO:0032886 P regulation of microtubule-based process
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0051726 P regulation of cell cycle
FPKM:18.37 TPM:14.09
2797 A_BomoASG_c13587_g1_i1
1284bp
 nuclear_migration_protein_nudC_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
FPKM:92.18 TPM:70.71
2798 A_BomoASG_c13588_g1_i1
602bp
FPKM:7.77 TPM:5.96
2799 A_BomoASG_c13589_g1_i1
403bp
FPKM:4.02 TPM:3.09
2800 A_BomoASG_c13590_g1_i1
2077bp
 uncharacterized_protein_LOC101735423_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:63.60 TPM:48.79
2801 A_BomoASG_c13590_g1_i2
212bp
 uncharacterized_protein_LOC101735423_isoform_X1_[Bombyx_mori]
FPKM:52.23 TPM:40.07
2802 A_BomoASG_c13590_g1_i3
2141bp
 uncharacterized_protein_LOC101735423_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:19.75 TPM:15.15
2803 A_BomoASG_c13591_g1_i1
274bp
 Fanconi_anemia,_complementation_group_I_isoform_X1_[Bombyx_mori]
FPKM:2.43 TPM:1.87
2804 A_BomoASG_c13592_g1_i1
300bp
FPKM:2.01 TPM:1.54
2805 A_BomoASG_c13593_g1_i1
405bp
FPKM:2.11 TPM:1.62
2806 A_BomoASG_c13593_g1_i2
424bp
FPKM:0.00 TPM:0.00
2807 A_BomoASG_c13594_g1_i1
1898bp
 T-complex_protein_1_subunit_eta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002199 C zona pellucida receptor complex
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005832 C chaperonin-containing T-complex
GO:0005874 C microtubule
GO:0006457 P protein folding
GO:0007339 P binding of sperm to zona pellucida
GO:0042802 F identical protein binding
GO:0044297 C cell body
GO:0051082 F unfolded protein binding
GO:0070062 C extracellular exosome
GO:1901998 P toxin transport
FPKM:96.23 TPM:73.81
2808 A_BomoASG_c13595_g1_i1
616bp
 cadherin-99C_[Bombyx_mori]
GO:0001750 C photoreceptor outer segment
GO:0001964 P startle response
GO:0002009 P morphogenesis of an epithelium
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007628 P adult walking behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032403 F protein-containing complex binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0035058 P non-motile cilium assembly
GO:0035264 P multicellular organism growth
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0047485 F protein N-terminus binding
GO:0048839 P inner ear development
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0050973 P detection of mechanical stimulus involved in equilibrioception
GO:0051017 P actin filament bundle assembly
GO:0051592 P response to calcium ion
GO:0060013 P righting reflex
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0070062 C extracellular exosome
FPKM:2.94 TPM:2.25
2809 A_BomoASG_c13596_g1_i1
2455bp
 PREDICTED:_ATP-dependent_RNA_helicase_Ddx1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0007283 P spermatogenesis
GO:0008026 F helicase activity
GO:0008143 F poly(A) binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0033677 F DNA/RNA helicase activity
GO:0042254 P ribosome biogenesis
GO:0048477 P oogenesis
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:1903506 P regulation of nucleic acid-templated transcription
FPKM:39.19 TPM:30.06
2810 A_BomoASG_c13598_g1_i1
201bp
FPKM:1.12 TPM:0.86
2811 A_BomoASG_c13599_g1_i1
258bp
FPKM:4.47 TPM:3.43
2812 A_BomoASG_c1359_g1_i1
202bp
FPKM:2.20 TPM:1.69
2813 A_BomoASG_c135_g1_i1
210bp
FPKM:0.00 TPM:0.00
2814 A_BomoASG_c135_g2_i1
365bp
 hypothetical_protein_[Acinetobacter_baumannii]
FPKM:2.23 TPM:1.71
2815 A_BomoASG_c13601_g1_i1
475bp
FPKM:12.12 TPM:9.30
2816 A_BomoASG_c13602_g1_i1
506bp
FPKM:4.19 TPM:3.21
2817 A_BomoASG_c13603_g1_i1
453bp
FPKM:0.38 TPM:0.29
2818 A_BomoASG_c13603_g1_i2
1702bp
 protein_lingerer_isoform_X5_[Bombyx_mori]
FPKM:37.38 TPM:28.68
2819 A_BomoASG_c13605_g1_i1
283bp
FPKM:0.45 TPM:0.35
2820 A_BomoASG_c13606_g1_i1
360bp
FPKM:2.00 TPM:1.53
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