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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c13596_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_Ddx1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0007283 P spermatogenesis
GO:0008026 F helicase activity
GO:0008143 F poly(A) binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0033677 F DNA/RNA helicase activity
GO:0042254 P ribosome biogenesis
GO:0048477 P oogenesis
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:1903506 P regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:39.19 TPM:30.06
ORF EntryO_BomoASG2609_complete:A_BomoASG_c13596_g1_i1
Sequence
(Nucleotide)
CACCGGTACCCATCTGTGCGCATACATACCGTATGCTGAATAAAACTGAAAACACTATTT
AAAATAGCATAATTCTTTAAAAGATGACTGCTTTCGAAGAATTTGGTGTGCTGCCTGAAA
TAGGCAAAGCTATTGAAGAAATGGATTGGACTCTACCGACTGATGTCCAAGCCGAAGCTA
TTCCCCTAATCTTAGGCGGTGGAGATGTACTTATGGCAGCCGAAACTGGCAGTGGAAAGA
CAGGAGCATTCTGTTTACCTATATTGCAGATTGTCTGGGAAACCTTGAAAGATATGCAGG
AAGGAAAAACCGGTAAAGTAATAACACAAACGTCTTCTGAGTGTACTATGTCATTTTTCG
ATCGCACTGACGCACTGGCTGTTACTCCTGACGGGTTACGGTGTCAATCCAGAAATCAAA
AAGACTGGCACGGGTGTAGGGCAACCAAAGGTGTTCATACGAAAGGTGCATATTACTTTG
AAGCCACTGTCACTGATGAGGGCTTATGCCGTGTCGGCTGGTCTACACAAGCGGCAAAGC
TGGATCTTGGAACTGACAGGCTAGGCTATGGATTTGGTGGTACAGGCAAGAAATCAAATT
GTAAGCAATTTGATGATTATGGCGAGGCTTATGGGATGAATGATGTCATTGGCTGTTTCC
TGAATTTAAATAATGGTGAAATTCGATACTCTAAAAACGGAGAAGACTTGGGTGTGGCTT
TCAGTCTTGATTCATCTAGAAAGTCAGACTGTTACTTCCCTGCAGTTGTCTTGAAAAATG
CTGAGATGAGTTTTAACTTTGGTGCCACACCATTTAAGTACCCACCACCAAACGGATACA
TAGCAATCAGTCAAGCACCCAAAGAAAACGTCAAGCAGAATGTTATAGCCGCTGTAGCTT
CAACAGATATTAAACCAGTGAATAATGCACCGCAGGCTATTATTATTGAGCCGTCCAGAG
AATTAGCGGAGCAGACCTGTACACAATTTACGAAATTCAAGAAGTATTTAGAAAATCCCA
AAATTCGGGAGCTGCTGGTTGTTGGAGGTATAAATGTTAAAGATCAAATTAACCAGTTGA
ACTGTGGGGTGGATGTCGTCGTTGGGACGCCGGGACGCTTGGAAGACCTTATCCAAGGAG
GATACTTATCACTGACGCATTGCCGTTTCTTCGTCTTGGACGAGGCTGATGGTCTCTTGA
AAGCGGGTTACGGAGAACTGATTGAACGCCTCCATCGTCAGATCCCGAAGATAACATCCG
ATGGACGGAGACTGCAGATGGTTGTGTGTTCGGCAACCCTGCACGCATTCGAAGTCAAGA
AAATGGCTGAAAAATTAATGCACTTTCCGACTTGGGTCGATTTGAAAGGGGAAGACGCAG
TTCCTGAGACCGTACACCATGTTGTTGTGAACGTAGACCCGCAAAAGGACAGCTCTTGGC
AAACACTGCGCAAGCACGTGCAGACCGACGGTGTGCACGCTAAGGACAACATTCGAAGCG
GCAACACTACGCCTGAAACGTTGTCTGAAGCTGTTAAGATACTGAAAGGAGAATACTGTG
TGCGCGCCATCAGGGAACACAAAATGGACCGGGCCATAATATTCTGCCGCACTAAATTGG
ATTGCGACAACCTCGAGCGGTACTTCAAAACGTTCGGCAATGAGCTGTCCTGTGTGTGCC
TGCACGGCGACCGAAAACCAAAGGAGCGCAAAGACAATTTGGAGATATTCAAGAACAGCC
AAGTGAAGTTTTTGATTTGCACCGACGTCGCTGCTCGCGGCATCGACATCTCGGGCCTGC
CGTTCATGATCAACATAACGCTTCCCGACGAAAAGTCCAACTACGTACATCGCATCGGGC
GCGTCGGTCGCGCGGAACGCATGGGCCTGGCCATCAGTCTCGTCTCCACCGTACCCGAAA
AGGTATGGTATCATGGCGAGTGGTGTTCATCTCGCGGACGGAACTGCTGGAACACTAATC
TGATTGACGACAAACCTAAGGGATGCTGCATGTGGTACAATGAACCTCAGTACCTGGCGG
ATATTGAAGATCACCTAAATATCACGATACAGCAGGTCGAGACGGATATGAAAGTCCCAT
CCAATGAGTTTGACGGTAAAGTAGTTTACGGTGAAAAAAGAAAACAAGCTGGTTCCGGAT
ACCAAGACCATGTCAGTCAAATGGCGCCTGTTGTGAAATCTCTGCAAGAGCTAGAGTCGC
AAGCACAACTCTACTATCTTAAAATGCATCATAATGTCTCCATTTCTTGAATCAGAAATA
TAATTAAAATATCTACTAATTTATTGTCGCATATTAATTAAACTGATTAGAGCGCAGGTG
ACTTTTATTTAAAATATTATTTAACAGACAAATTGATTTATTATTTTTAGCCTCGTAAGG
CTGCCTGTCCACCGGAGCGGAGCAAGGCAGTGGAGCGGACAGATCGGAAGAGCGT
(2455 bp)

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