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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2731 A_BomoASG_c13510_g1_i1
478bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.46 TPM:1.12
2732 A_BomoASG_c13511_g1_i1
274bp
FPKM:8.76 TPM:6.72
2733 A_BomoASG_c13512_g1_i1
488bp
 LOW_QUALITY_PROTEIN:_chondroitin_sulfate_proteoglycan_4_[Bombyx_mori]
GO:0000187 P obsolete activation of MAPK activity
GO:0001525 P angiogenesis
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0008347 P glial cell migration
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016477 P cell migration
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030203 P glycosaminoglycan metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030207 P chondroitin sulfate catabolic process
GO:0030208 P dermatan sulfate biosynthetic process
GO:0031258 C lamellipodium membrane
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043202 C lysosomal lumen
GO:0048771 P tissue remodeling
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0070062 C extracellular exosome
FPKM:4.41 TPM:3.39
2734 A_BomoASG_c13513_g1_i1
1229bp
 LOW_QUALITY_PROTEIN:_probable_protein_phosphatase_2C_20_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0009267 P cellular response to starvation
GO:0009314 P response to radiation
GO:0009617 P response to bacterium
GO:0016787 F hydrolase activity
GO:0035970 P peptidyl-threonine dephosphorylation
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0051019 F mitogen-activated protein kinase binding
FPKM:27.40 TPM:21.02
2735 A_BomoASG_c13514_g1_i1
205bp
FPKM:3.14 TPM:2.41
2736 A_BomoASG_c13514_g2_i1
218bp
FPKM:1.74 TPM:1.33
2737 A_BomoASG_c13514_g2_i2
218bp
FPKM:0.87 TPM:0.67
2738 A_BomoASG_c13516_g1_i1
5409bp
 serine/arginine_repetitive_matrix_protein_2_[Bombyx_mori]
FPKM:18.39 TPM:14.11
2739 A_BomoASG_c13516_g1_i2
6044bp
 serine/arginine_repetitive_matrix_protein_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000793 C condensed chromosome
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0007049 P cell cycle
GO:0007126 P meiotic cell cycle
GO:0008022 F protein C-terminus binding
GO:0008283 P cell population proliferation
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0030212 P hyaluronan metabolic process
GO:0031100 P animal organ regeneration
GO:0034605 P cellular response to heat
GO:0044822 F RNA binding
GO:0072574 P hepatocyte proliferation
GO:1990705 P cholangiocyte proliferation
FPKM:19.32 TPM:14.82
2740 A_BomoASG_c13516_g1_i3
5192bp
 serine/arginine_repetitive_matrix_protein_2_[Bombyx_mori]
FPKM:22.97 TPM:17.62
2741 A_BomoASG_c13518_g1_i1
421bp
FPKM:2.32 TPM:1.78
2742 A_BomoASG_c13518_g1_i2
571bp
FPKM:1.62 TPM:1.25
2743 A_BomoASG_c13519_g1_i1
279bp
FPKM:13.57 TPM:10.41
2744 A_BomoASG_c1351_g1_i1
217bp
FPKM:6.16 TPM:4.72
2745 A_BomoASG_c13521_g1_i1
370bp
FPKM:1.65 TPM:1.27
2746 A_BomoASG_c13521_g1_i2
418bp
FPKM:1.55 TPM:1.19
2747 A_BomoASG_c13522_g1_i1
944bp
 lysM_and_putative_peptidoglycan-binding_domain-containing_protein_3_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.43 TPM:0.33
2748 A_BomoASG_c13522_g1_i2
1047bp
 lysM_and_putative_peptidoglycan-binding_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:24.67 TPM:18.92
2749 A_BomoASG_c13523_g1_i1
307bp
FPKM:9.21 TPM:7.07
2750 A_BomoASG_c13525_g1_i1
268bp
 ataxin-10_[Bombyx_mori]
FPKM:10.74 TPM:8.24
2751 A_BomoASG_c13526_g1_i1
582bp
FPKM:2.34 TPM:1.80
2752 A_BomoASG_c13527_g1_i1
271bp
FPKM:2.99 TPM:2.30
2753 A_BomoASG_c13529_g1_i1
207bp
 tyrosine_decarboxylase_[Bombyx_mori]
GO:0001694 P histamine biosynthetic process
GO:0003824 F catalytic activity
GO:0004398 F histidine decarboxylase activity
GO:0006520 P cellular amino acid metabolic process
GO:0006548 P histidine catabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042423 P catecholamine biosynthetic process
FPKM:2.03 TPM:1.56
2754 A_BomoASG_c1352_g1_i1
392bp
FPKM:6.68 TPM:5.13
2755 A_BomoASG_c13530_g1_i1
225bp
FPKM:7.98 TPM:6.12
2756 A_BomoASG_c13534_g1_i1
1608bp
 soluble_calcium-activated_nucleotidase_1_[Bombyx_mori]
GO:0004382 F guanosine-diphosphatase activity
GO:0004871 F obsolete signal transducer activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016462 F pyrophosphatase activity
GO:0016787 F hydrolase activity
GO:0017110 F nucleoside-diphosphatase activity
GO:0030166 P proteoglycan biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045134 F uridine-diphosphatase activity
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:39.76 TPM:30.50
2757 A_BomoASG_c13535_g1_i1
368bp
FPKM:3.03 TPM:2.32
2758 A_BomoASG_c13536_g1_i1
3715bp
 papilin-like_[Helicoverpa_armigera]
GO:0002020 F protease binding
GO:0004222 F metalloendopeptidase activity
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005614 C interstitial matrix
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0043065 P positive regulation of apoptotic process
FPKM:140.65 TPM:107.89
2759 A_BomoASG_c13538_g1_i1
357bp
FPKM:4.35 TPM:3.34
2760 A_BomoASG_c13539_g1_i1
227bp
FPKM:1.55 TPM:1.19
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