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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2581 A_BomoASG_c13341_g1_i1
661bp
 uncharacterized_protein_LOC110385079_[Bombyx_mori]
FPKM:1.86 TPM:1.43
2582 A_BomoASG_c13343_g1_i1
336bp
FPKM:0.66 TPM:0.51
2583 A_BomoASG_c13343_g1_i2
240bp
FPKM:3.97 TPM:3.04
2584 A_BomoASG_c13344_g1_i1
241bp
FPKM:2.64 TPM:2.03
2585 A_BomoASG_c13346_g1_i1
251bp
 major_facilitator_superfamily_domain-containing_protein_6_[Bombyx_mori]
FPKM:0.60 TPM:0.46
2586 A_BomoASG_c13348_g1_i1
990bp
 probable_DNA_mismatch_repair_protein_Msh6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000400 F four-way junction DNA binding
GO:0000710 P meiotic mismatch repair
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006301 P postreplication repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 P response to UV
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032138 F single base insertion or deletion binding
GO:0032301 C MutSalpha complex
GO:0043570 P maintenance of DNA repeat elements
GO:0045910 P negative regulation of DNA recombination
FPKM:2.64 TPM:2.02
2587 A_BomoASG_c13348_g1_i2
575bp
 probable_DNA_mismatch_repair_protein_Msh6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000400 F four-way junction DNA binding
GO:0000710 P meiotic mismatch repair
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006301 P postreplication repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 P response to UV
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032138 F single base insertion or deletion binding
GO:0032301 C MutSalpha complex
GO:0043570 P maintenance of DNA repeat elements
GO:0045910 P negative regulation of DNA recombination
FPKM:1.63 TPM:1.25
2588 A_BomoASG_c13349_g1_i1
2458bp
 presenilin-1_isoform_X2_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000186 P obsolete activation of MAPKK activity
GO:0000776 C kinetochore
GO:0001568 P blood vessel development
GO:0001708 P cell fate specification
GO:0001756 P somitogenesis
GO:0001764 P neuron migration
GO:0001921 P positive regulation of receptor recycling
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0001947 P heart looping
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0002286 P T cell activation involved in immune response
GO:0002573 P myeloid leukocyte differentiation
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005640 C nuclear outer membrane
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006469 P negative regulation of protein kinase activity
GO:0006486 P protein glycosylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006839 P mitochondrial transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007155 P cell adhesion
GO:0007175 P negative regulation of epidermal growth factor-activated receptor activity
GO:0007176 P regulation of epidermal growth factor-activated receptor activity
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0008013 F beta-catenin binding
GO:0008233 F peptidase activity
GO:0009791 P post-embryonic development
GO:0009986 C cell surface
GO:0015031 P protein transport
GO:0015813 P L-glutamate transmembrane transport
GO:0015871 P choline transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016080 P synaptic vesicle targeting
GO:0016235 C aggresome
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0021795 P cerebral cortex cell migration
GO:0021870 P Cajal-Retzius cell differentiation
GO:0021904 P dorsal/ventral neural tube patterning
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030182 P neuron differentiation
GO:0030326 P embryonic limb morphogenesis
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030900 P forebrain development
GO:0031410 C cytoplasmic vesicle
GO:0031965 C nuclear membrane
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032469 P endoplasmic reticulum calcium ion homeostasis
GO:0034205 P amyloid-beta formation
GO:0035253 C ciliary rootlet
GO:0035282 P segmentation
GO:0035556 P intracellular signal transduction
GO:0040011 P locomotion
GO:0042325 P regulation of phosphorylation
GO:0042987 P amyloid precursor protein catabolic process
GO:0043011 P myeloid dendritic cell differentiation
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:0043198 C dendritic shaft
GO:0043227 C membrane-bounded organelle
GO:0043393 P regulation of protein binding
GO:0043406 P positive regulation of MAP kinase activity
GO:0043589 P skin morphogenesis
GO:0044267 P cellular protein metabolic process
GO:0045121 C membrane raft
GO:0045296 F cadherin binding
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048167 P regulation of synaptic plasticity
GO:0048538 P thymus development
GO:0048666 P neuron development
GO:0048705 P skeletal system morphogenesis
GO:0048854 P brain morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0050673 P epithelial cell proliferation
GO:0050771 P negative regulation of axonogenesis
GO:0050820 P positive regulation of coagulation
GO:0050852 P T cell receptor signaling pathway
GO:0051402 P neuron apoptotic process
GO:0051444 P negative regulation of ubiquitin-protein transferase activity
GO:0051563 P smooth endoplasmic reticulum calcium ion homeostasis
GO:0051604 P protein maturation
GO:0051966 P regulation of synaptic transmission, glutamatergic
GO:0060070 P canonical Wnt signaling pathway
GO:0060075 P regulation of resting membrane potential
GO:0060999 P positive regulation of dendritic spine development
GO:0070588 P calcium ion transmembrane transport
GO:0070765 C gamma-secretase complex
GO:0098793 C presynapse
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
GO:2001234 P negative regulation of apoptotic signaling pathway
FPKM:28.53 TPM:21.88
2589 A_BomoASG_c13349_g1_i2
2491bp
 presenilin-1_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000186 P obsolete activation of MAPKK activity
GO:0000776 C kinetochore
GO:0001568 P blood vessel development
GO:0001708 P cell fate specification
GO:0001756 P somitogenesis
GO:0001764 P neuron migration
GO:0001921 P positive regulation of receptor recycling
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0001947 P heart looping
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0002286 P T cell activation involved in immune response
GO:0002573 P myeloid leukocyte differentiation
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005640 C nuclear outer membrane
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006469 P negative regulation of protein kinase activity
GO:0006486 P protein glycosylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006839 P mitochondrial transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007155 P cell adhesion
GO:0007175 P negative regulation of epidermal growth factor-activated receptor activity
GO:0007176 P regulation of epidermal growth factor-activated receptor activity
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0008013 F beta-catenin binding
GO:0008233 F peptidase activity
GO:0009791 P post-embryonic development
GO:0009986 C cell surface
GO:0015031 P protein transport
GO:0015813 P L-glutamate transmembrane transport
GO:0015871 P choline transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016080 P synaptic vesicle targeting
GO:0016235 C aggresome
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0021795 P cerebral cortex cell migration
GO:0021870 P Cajal-Retzius cell differentiation
GO:0021904 P dorsal/ventral neural tube patterning
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030182 P neuron differentiation
GO:0030326 P embryonic limb morphogenesis
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030900 P forebrain development
GO:0031410 C cytoplasmic vesicle
GO:0031965 C nuclear membrane
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032469 P endoplasmic reticulum calcium ion homeostasis
GO:0034205 P amyloid-beta formation
GO:0035253 C ciliary rootlet
GO:0035282 P segmentation
GO:0035556 P intracellular signal transduction
GO:0040011 P locomotion
GO:0042325 P regulation of phosphorylation
GO:0042987 P amyloid precursor protein catabolic process
GO:0043011 P myeloid dendritic cell differentiation
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:0043198 C dendritic shaft
GO:0043227 C membrane-bounded organelle
GO:0043393 P regulation of protein binding
GO:0043406 P positive regulation of MAP kinase activity
GO:0043589 P skin morphogenesis
GO:0044267 P cellular protein metabolic process
GO:0045121 C membrane raft
GO:0045296 F cadherin binding
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048167 P regulation of synaptic plasticity
GO:0048538 P thymus development
GO:0048666 P neuron development
GO:0048705 P skeletal system morphogenesis
GO:0048854 P brain morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0050673 P epithelial cell proliferation
GO:0050771 P negative regulation of axonogenesis
GO:0050820 P positive regulation of coagulation
GO:0050852 P T cell receptor signaling pathway
GO:0051402 P neuron apoptotic process
GO:0051444 P negative regulation of ubiquitin-protein transferase activity
GO:0051563 P smooth endoplasmic reticulum calcium ion homeostasis
GO:0051604 P protein maturation
GO:0051966 P regulation of synaptic transmission, glutamatergic
GO:0060070 P canonical Wnt signaling pathway
GO:0060075 P regulation of resting membrane potential
GO:0060999 P positive regulation of dendritic spine development
GO:0070588 P calcium ion transmembrane transport
GO:0070765 C gamma-secretase complex
GO:0098793 C presynapse
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
GO:2001234 P negative regulation of apoptotic signaling pathway
FPKM:21.41 TPM:16.42
2590 A_BomoASG_c1334_g1_i1
901bp
 glutathione_S-transferase_1,_isoform_C-like_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0018833 F DDT-dehydrochlorinase activity
FPKM:36.19 TPM:27.76
2591 A_BomoASG_c13351_g1_i1
372bp
FPKM:29.72 TPM:22.79
2592 A_BomoASG_c13352_g1_i1
415bp
FPKM:18.06 TPM:13.86
2593 A_BomoASG_c13353_g1_i1
1085bp
 SH3_domain-binding_glutamic_acid-rich_protein_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0017124 F SH3 domain binding
FPKM:154.91 TPM:118.82
2594 A_BomoASG_c13354_g1_i1
210bp
FPKM:1.94 TPM:1.49
2595 A_BomoASG_c13355_g1_i1
437bp
FPKM:3.33 TPM:2.56
2596 A_BomoASG_c13357_g1_i1
249bp
FPKM:7.30 TPM:5.60
2597 A_BomoASG_c13358_g1_i1
216bp
FPKM:0.89 TPM:0.68
2598 A_BomoASG_c13358_g2_i1
241bp
FPKM:6.60 TPM:5.06
2599 A_BomoASG_c13359_g1_i1
429bp
 guanine_nucleotide_exchange_factor_subunit_Rich_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0032483 P regulation of Rab protein signal transduction
GO:0034066 C Ric1-Rgp1 guanyl-nucleotide exchange factor complex
GO:0035418 P protein localization to synapse
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0045467 P R7 cell development
GO:0050808 P synapse organization
GO:0060078 P regulation of postsynaptic membrane potential
GO:1903363 P negative regulation of cellular protein catabolic process
FPKM:7.29 TPM:5.59
2600 A_BomoASG_c13360_g1_i1
307bp
 LOW_QUALITY_PROTEIN:_protein_scabrous_[Bombyx_mori]
FPKM:3.07 TPM:2.36
2601 A_BomoASG_c13361_g1_i1
241bp
 uncharacterized_protein_C1orf112_homolog_isoform_X1_[Bombyx_mori]
FPKM:3.96 TPM:3.04
2602 A_BomoASG_c13362_g1_i1
270bp
FPKM:2.01 TPM:1.54
2603 A_BomoASG_c13364_g1_i1
231bp
FPKM:1.48 TPM:1.13
2604 A_BomoASG_c13365_g1_i1
231bp
FPKM:1.48 TPM:1.13
2605 A_BomoASG_c13367_g1_i1
653bp
 uncharacterized_protein_LOC101737225_[Bombyx_mori]
GO:0004059 F aralkylamine N-acetyltransferase activity
GO:0004060 F arylamine N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0006584 P catecholamine metabolic process
GO:0008080 F N-acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0030187 P melatonin biosynthetic process
GO:0030431 P sleep
GO:0042420 P dopamine catabolic process
GO:0042429 P serotonin catabolic process
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0046334 P octopamine catabolic process
GO:0048066 P developmental pigmentation
FPKM:1.18 TPM:0.91
2606 A_BomoASG_c13368_g1_i1
263bp
FPKM:0.61 TPM:0.47
2607 A_BomoASG_c13368_g1_i2
421bp
FPKM:3.94 TPM:3.02
2608 A_BomoASG_c13372_g1_i1
353bp
 C-type_lectin_11_[Operophtera_brumata]
FPKM:1.48 TPM:1.13
2609 A_BomoASG_c13374_g1_i1
430bp
FPKM:3.56 TPM:2.73
2610 A_BomoASG_c13375_g1_i1
378bp
 Acidic_mammalian_chitinase_[Papilio_machaon]
FPKM:1.58 TPM:1.21
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