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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c13349_g1_i2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		presenilin-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000186 P obsolete activation of MAPKK activity
GO:0000776 C kinetochore
GO:0001568 P blood vessel development
GO:0001708 P cell fate specification
GO:0001756 P somitogenesis
GO:0001764 P neuron migration
GO:0001921 P positive regulation of receptor recycling
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0001947 P heart looping
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0002286 P T cell activation involved in immune response
GO:0002573 P myeloid leukocyte differentiation
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005640 C nuclear outer membrane
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006469 P negative regulation of protein kinase activity
GO:0006486 P protein glycosylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006839 P mitochondrial transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007155 P cell adhesion
GO:0007175 P negative regulation of epidermal growth factor-activated receptor activity
GO:0007176 P regulation of epidermal growth factor-activated receptor activity
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0008013 F beta-catenin binding
GO:0008233 F peptidase activity
GO:0009791 P post-embryonic development
GO:0009986 C cell surface
GO:0015031 P protein transport
GO:0015813 P L-glutamate transmembrane transport
GO:0015871 P choline transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016080 P synaptic vesicle targeting
GO:0016235 C aggresome
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0021795 P cerebral cortex cell migration
GO:0021870 P Cajal-Retzius cell differentiation
GO:0021904 P dorsal/ventral neural tube patterning
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030182 P neuron differentiation
GO:0030326 P embryonic limb morphogenesis
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030900 P forebrain development
GO:0031410 C cytoplasmic vesicle
GO:0031965 C nuclear membrane
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032469 P endoplasmic reticulum calcium ion homeostasis
GO:0034205 P amyloid-beta formation
GO:0035253 C ciliary rootlet
GO:0035282 P segmentation
GO:0035556 P intracellular signal transduction
GO:0040011 P locomotion
GO:0042325 P regulation of phosphorylation
GO:0042987 P amyloid precursor protein catabolic process
GO:0043011 P myeloid dendritic cell differentiation
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:0043198 C dendritic shaft
GO:0043227 C membrane-bounded organelle
GO:0043393 P regulation of protein binding
GO:0043406 P positive regulation of MAP kinase activity
GO:0043589 P skin morphogenesis
GO:0044267 P cellular protein metabolic process
GO:0045121 C membrane raft
GO:0045296 F cadherin binding
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048167 P regulation of synaptic plasticity
GO:0048538 P thymus development
GO:0048666 P neuron development
GO:0048705 P skeletal system morphogenesis
GO:0048854 P brain morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0050673 P epithelial cell proliferation
GO:0050771 P negative regulation of axonogenesis
GO:0050820 P positive regulation of coagulation
GO:0050852 P T cell receptor signaling pathway
GO:0051402 P neuron apoptotic process
GO:0051444 P negative regulation of ubiquitin-protein transferase activity
GO:0051563 P smooth endoplasmic reticulum calcium ion homeostasis
GO:0051604 P protein maturation
GO:0051966 P regulation of synaptic transmission, glutamatergic
GO:0060070 P canonical Wnt signaling pathway
GO:0060075 P regulation of resting membrane potential
GO:0060999 P positive regulation of dendritic spine development
GO:0070588 P calcium ion transmembrane transport
GO:0070765 C gamma-secretase complex
GO:0098793 C presynapse
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
GO:2001234 P negative regulation of apoptotic signaling pathway
Transcript
Level		FPKM:21.41 TPM:16.42
ORF EntryO_BomoASG2496_complete:A_BomoASG_c13349_g1_i2
Sequence
(Nucleotide)
GTTTGACTTTTATGGTTTTACCTACTTTGTCGTGAGTTTTATCTTTGTGTTTTTTTAAGA
TACTACGCCTACGCCTACATTTAAACCTTGCCTTTTAACAAAATGCGAGCATTATTCCAA
AGATAATTGAATGAGTGAGTCAGGCAGTGACTTAGACGCAACCGAGCACACTGCACTCAT
GGACGGCCACATCGCAGAAGCTCGTCCTGACAGGGAGTTAGCTGAAAGGATAGCTAGGAA
ACGAAAGACTAAATCCGATAATCAGCGCTCCTATGGCAGTGTAGAACAGATTGAAGGTGG
CCCATCGGGGGCTTCTATTGCCCAGCAACCTCGAGTTCCAGCAGCACCAGTGGAACCACA
GATTGAGGAGCTGGAGTTGAAGTATGGGGCTCGCCATGTCATCAAACTGTTTGTGCCTGT
CACATTGTGCATGCTCGTAGTTGTTGCAACAATATCATCTATAAATTTTTACTCCGTTAA
AGATGTATATTTGGCATATACACCGTTTCATGAAGAGAGTCCATACGCATCAACAAAAGT
GTGGAATGCATTGGCCAATTCGATGATCTTGTTGTGTGTGATTGCATTAATGACGGTGTT
ACTTATTGTGCTTTACAAGAAAAAATGCTACAAGACTATTCATGGATGGTTGATTCTATC
ATCATTAATCTTGCTGTTTCTATTCTCTTACTTGTATATTGAGGAAGCACTCATTGCCTA
TAATATACCAATGGATTATATAACTTTAGGCTTTGTGTTGTGGAATTTTGGAGTCATGGG
CATGATTGTCATACATTGGAAGGGTCCGCTGAGGCTACAACAAGCTTACTTGATCTTCAT
TGCAGCCCTTATGGCACTTGTGTTCATCAAGTATTTGCCGGAATGGACAACATGGGCCGT
TCTTGCAGTGATATCTATTTGGGATTTGGTGGCTGTATTAACACCGAAGGGACCTTTGAG
AATATTGGTTGAAACAGCACAGGAACGCAATGAGCCTATATTTCCAGCTCTCATTTATTC
ATCGACAGTGATGTACTGCATGGCGGCAGCGAGCCCCGCGCCCGGCGCCGCAGGTGAGCG
CGAGCTGCGCCCGCTGCAACCGCACGGAACTGTCGAGGGCGAAGGTCGCGACGGCACGGA
GGCGGGGGGCGGGGAGGCGGGGTTCGACGCGGCGTGGAGGGAGAGACGCGACGAGGGTGC
GGCGCCGCGCCGGCTGCGGGTCGACTCTGCGCCGCCGCGCTACGTCACGCGCCTCGACCC
GCCGCACGCGCCCCACGCGCCGCCGCACGCGCCCGACCTCGACGAGGAGAAAGGCGTAAA
ACTTGGTCTAGGTGATTTCATATTCTATAGTGTCCTCGTAGGAAAAGCAAGTTCATACGG
CGATTGGAATACAACATTAGCCTGTTTTGTAGCTATACTTATAGGTTTATGTCTAACACT
CCTGCTGCTCGCCATATTAAAGAAGGCTCTTCCGGCGCTCCCTATATCGATAACATTCGG
ACTTATATTCTATTTCGCAACGCGATCGGTCGTGAAGCCATTTGCGGACGCTTTGGCGGC
GGAACAGGTGTTCATTTAGCAAATACTCGTGTGTGCGTAAGGTAGATAGAAGTCGACAAA
CATTCTGTAAAAGCAGATCACATTTTTATGTTAAAATTAATTTGCAGTATTTTATTTTAA
TTATTTTCGTATTAATTAAAAATGTGTTTCGATATGTGTATAAAGGAATTTATTTGTTGC
AAAAAAAAACTCCAATATTTCATTGAAACGATGGGAAAAATAACTTATTTTGAAATAATA
TGCGTAAATTCGTTAATCCGGAACTAACGAATTTGGAAATAGGGTGCCCCAGTAAACTAA
CTTTGCGTAACCATACCGAATTGTATTTTTTATTGCTACCAGAGTCAATTGATTAGAGGG
CCGGTCTAGTGGTAATTACCGTAGCCCGTGGACATCTGTGAAAATGAGCGCGGCCAGCTC
ACTGTTCGTCTTTTTTTGTAATATCGCTCAATTACCTTCAAATAACAAAATTGTTTACGA
TATACTTGTCTTTATGTCGGCCGTCTTATTTAAGACAGATAAAGTATTACTTTGATTCCC
TATTCAGGCTTTATTGACTCCACCCAACCGACATAGAAGTGAAAAGTACTTATTTTGGCA
GACAAATGCCTCGCTTATTGCTCAAAATTCCCATGCCTATCGTAGCAAGTGTAGTTAGCT
GCGGCATTTCCGTCGAAGCAACGTTCCTCATTAGTGAGGAAACGACTTGGGTAGCGCCTT
TAGTGCCACGCTTATAATGAAATACCCACGTCTAAAAGAACACTGAAAATACTGCAGACA
AAATAAAAACACTATGTATTACAAAGATAACTCAAATTCGAATCGTAACTAAAATAAAAT
ATTCAGTTTCATTTAGGTATTTCATACAATTCACAACAATACAAACAAAAAACATTTTCA
AAGTTAAATGAACATTCCACAGATCGGAAGA
(2491 bp)

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