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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2311 A_BomoASG_c1305_g1_i1
428bp
FPKM:3.44 TPM:2.64
2312 A_BomoASG_c13060_g1_i1
362bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_exportin-6-like_[Papilio_machaon]
FPKM:6.51 TPM:4.99
2313 A_BomoASG_c13062_g1_i1
255bp
unnamed_protein_product_[Homo_sapiens]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048741 P skeletal muscle fiber development
FPKM:0.00 TPM:0.00
2314 A_BomoASG_c13064_g1_i1
489bp
FPKM:1.76 TPM:1.35
2315 A_BomoASG_c13065_g1_i1
441bp
FPKM:3.90 TPM:2.99
2316 A_BomoASG_c13067_g1_i1
877bp
FPKM:6.86 TPM:5.26
2317 A_BomoASG_c13069_g1_i1
394bp
 uncharacterized_protein_LOC105841856_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
FPKM:2.70 TPM:2.07
2318 A_BomoASG_c13070_g1_i1
1190bp
 pyridoxal-dependent_decarboxylase_domain-containing_protein_1_isoform_X3_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
FPKM:18.41 TPM:14.12
2319 A_BomoASG_c13071_g1_i1
211bp
FPKM:18.18 TPM:13.95
2320 A_BomoASG_c13072_g1_i1
737bp
 telomerase_Cajal_body_protein_1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005697 C telomerase holoenzyme complex
GO:0005737 C cytoplasm
GO:0015030 C Cajal body
GO:0032203 P telomere formation via telomerase
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0051973 P positive regulation of telomerase activity
GO:0070034 F telomerase RNA binding
FPKM:2.53 TPM:1.94
2321 A_BomoASG_c13073_g1_i1
234bp
 PREDICTED:_uncharacterized_protein_LOC106710902_[Papilio_machaon]
FPKM:2.85 TPM:2.19
2322 A_BomoASG_c13074_g1_i1
590bp
 uncharacterized_protein_LOC101747207_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:3.52 TPM:2.70
2323 A_BomoASG_c13075_g1_i1
248bp
 uncharacterized_protein_LOC110372995_[Helicoverpa_armigera]
FPKM:1.84 TPM:1.41
2324 A_BomoASG_c13076_g1_i1
2936bp
 CLIP-associating_protein_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:39.22 TPM:30.08
2325 A_BomoASG_c13076_g1_i2
225bp
 CLIP-associating_protein_[Bombyx_mori]
FPKM:4.88 TPM:3.74
2326 A_BomoASG_c13076_g1_i3
2692bp
 CLIP-associating_protein_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:4.29 TPM:3.29
2327 A_BomoASG_c13077_g1_i1
1410bp
 WD_repeat-containing_protein_5_[Helicoverpa_armigera]
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005875 C microtubule associated complex
GO:0006338 P chromatin remodeling
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016573 P histone acetylation
GO:0022008 P neurogenesis
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0044545 C NSL complex
GO:0044665 C MLL1/2 complex
GO:0044666 C MLL3/4 complex
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
FPKM:36.62 TPM:28.09
2328 A_BomoASG_c13078_g1_i1
233bp
FPKM:4.33 TPM:3.32
2329 A_BomoASG_c13079_g1_i1
3613bp
 zinc_finger_protein_629_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001709 P cell fate determination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007298 P border follicle cell migration
GO:0007422 P peripheral nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008360 P regulation of cell shape
GO:0016476 P regulation of embryonic cell shape
GO:0017053 C transcription repressor complex
GO:0030707 P ovarian follicle cell development
GO:0031208 F POZ domain binding
GO:0031987 P locomotion involved in locomotory behavior
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035147 P branch fusion, open tracheal system
GO:0035151 P regulation of tube size, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042675 P compound eye cone cell differentiation
GO:0042682 P regulation of compound eye cone cell fate specification
GO:0042803 F protein homodimerization activity
GO:0043388 P positive regulation of DNA binding
GO:0045467 P R7 cell development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046843 P dorsal appendage formation
GO:0046872 F metal ion binding
GO:0048053 P R1/R6 development
GO:0048666 P neuron development
GO:0048750 P compound eye corneal lens morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
GO:0060446 P branching involved in open tracheal system development
FPKM:24.14 TPM:18.51
2330 A_BomoASG_c13079_g1_i2
3630bp
 zinc_finger_and_BTB_domain-containing_protein_17_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001709 P cell fate determination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007298 P border follicle cell migration
GO:0007422 P peripheral nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008360 P regulation of cell shape
GO:0016476 P regulation of embryonic cell shape
GO:0017053 C transcription repressor complex
GO:0030707 P ovarian follicle cell development
GO:0031208 F POZ domain binding
GO:0031987 P locomotion involved in locomotory behavior
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035147 P branch fusion, open tracheal system
GO:0035151 P regulation of tube size, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042675 P compound eye cone cell differentiation
GO:0042682 P regulation of compound eye cone cell fate specification
GO:0042803 F protein homodimerization activity
GO:0043388 P positive regulation of DNA binding
GO:0045467 P R7 cell development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046843 P dorsal appendage formation
GO:0046872 F metal ion binding
GO:0048053 P R1/R6 development
GO:0048666 P neuron development
GO:0048750 P compound eye corneal lens morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
GO:0060446 P branching involved in open tracheal system development
FPKM:31.57 TPM:24.22
2331 A_BomoASG_c13080_g1_i1
303bp
 hypothetical_protein_ALC57_10508_[Trachymyrmex_cornetzi]
FPKM:1.18 TPM:0.91
2332 A_BomoASG_c13084_g1_i1
3321bp
 glycogen_synthase_kinase-3_beta_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:0050321 F tau-protein kinase activity
GO:0060070 P canonical Wnt signaling pathway
FPKM:47.62 TPM:36.53
2333 A_BomoASG_c13085_g1_i1
294bp
FPKM:3.77 TPM:2.89
2334 A_BomoASG_c13086_g1_i1
580bp
 THAP_domain-containing_protein_9_[Trachymyrmex_zeteki]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:1.25 TPM:0.96
2335 A_BomoASG_c13086_g1_i2
353bp
 THAP_domain-containing_protein_9,_partial_[Camponotus_floridanus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
2336 A_BomoASG_c13088_g1_i1
420bp
 Uncharacterized_protein_OBRU01_16402,_partial_[Operophtera_brumata]
FPKM:2.22 TPM:1.70
2337 A_BomoASG_c13089_g1_i1
759bp
 mediator_of_RNA_polymerase_II_transcription_subunit_20_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:22.73 TPM:17.43
2338 A_BomoASG_c1308_g1_i1
619bp
 protein_pigeon_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.90 TPM:1.46
2339 A_BomoASG_c13091_g1_i1
300bp
FPKM:6.43 TPM:4.93
2340 A_BomoASG_c13093_g1_i1
419bp
FPKM:4.00 TPM:3.07
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