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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2341 A_BomoASG_c13095_g1_i1
1293bp
 ubiquitin_conjugating_enzyme_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
FPKM:48.33 TPM:37.07
2342 A_BomoASG_c13095_g1_i2
1219bp
 ubiquitin_conjugating_enzyme_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
FPKM:6.59 TPM:5.06
2343 A_BomoASG_c13096_g1_i1
419bp
 cholinesterase_2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:3.34 TPM:2.56
2344 A_BomoASG_c13098_g1_i1
466bp
 PREDICTED:_CUE_domain-containing_protein_2-like,_partial_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0010936 P negative regulation of macrophage cytokine production
GO:0031965 C nuclear membrane
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
FPKM:3.40 TPM:2.61
2345 A_BomoASG_c13099_g1_i1
821bp
 28S_ribosomal_protein_S18a,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:42.74 TPM:32.78
2346 A_BomoASG_c1309_g1_i1
330bp
FPKM:1.34 TPM:1.03
2347 A_BomoASG_c130_g1_i1
606bp
 zinc_carboxypeptidase_A_1_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:1.48 TPM:1.14
2348 A_BomoASG_c130_g1_i2
209bp
FPKM:0.63 TPM:0.48
2349 A_BomoASG_c13100_g1_i1
377bp
FPKM:2.38 TPM:1.82
2350 A_BomoASG_c13101_g1_i1
212bp
FPKM:16.98 TPM:13.02
2351 A_BomoASG_c13102_g1_i1
1099bp
FPKM:5.81 TPM:4.46
2352 A_BomoASG_c13103_g1_i1
202bp
FPKM:7.69 TPM:5.90
2353 A_BomoASG_c13105_g1_i1
2228bp
 hypothetical_protein_KGM_215481_[Danaus_plexippus_plexippus]
FPKM:64.71 TPM:49.63
2354 A_BomoASG_c13106_g1_i1
531bp
FPKM:1.72 TPM:1.32
2355 A_BomoASG_c13108_g1_i1
243bp
FPKM:2.59 TPM:1.98
2356 A_BomoASG_c13109_g1_i1
205bp
FPKM:2.09 TPM:1.61
2357 A_BomoASG_c1310_g1_i1
260bp
FPKM:3.84 TPM:2.94
2358 A_BomoASG_c13111_g1_i1
2896bp
FPKM:39.39 TPM:30.21
2359 A_BomoASG_c13112_g1_i1
686bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X25_[Bombyx_mori]
FPKM:2.00 TPM:1.53
2360 A_BomoASG_c13113_g1_i1
839bp
 THAP_domain-containing_protein_5_isoform_X2_[Bombyx_mori]
FPKM:4.22 TPM:3.24
2361 A_BomoASG_c13115_g1_i1
463bp
 E3_ubiquitin-protein_ligase_LRSAM1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005876 C spindle microtubule
GO:0006915 P apoptotic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0010939 P regulation of necrotic cell death
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0016874 F ligase activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0034121 P regulation of toll-like receptor signaling pathway
GO:0035666 P TRIF-dependent toll-like receptor signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0039535 P regulation of RIG-I signaling pathway
GO:0042981 P regulation of apoptotic process
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043234 C protein-containing complex
GO:0045088 P regulation of innate immune response
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0050727 P regulation of inflammatory response
GO:0051291 P protein heterooligomerization
GO:0060544 P regulation of necroptotic process
GO:0060546 P negative regulation of necroptotic process
GO:0070424 P regulation of nucleotide-binding oligomerization domain containing signaling pathway
GO:0090307 P mitotic spindle assembly
GO:1990001 P inhibition of cysteine-type endopeptidase activity involved in apoptotic process
GO:2000116 P regulation of cysteine-type endopeptidase activity
FPKM:3.24 TPM:2.49
2362 A_BomoASG_c13117_g1_i1
299bp
FPKM:2.43 TPM:1.86
2363 A_BomoASG_c13118_g1_i1
751bp
FPKM:17.89 TPM:13.72
2364 A_BomoASG_c13119_g1_i1
457bp
FPKM:1.75 TPM:1.34
2365 A_BomoASG_c13120_g1_i1
490bp
FPKM:3.69 TPM:2.83
2366 A_BomoASG_c13121_g1_i1
2441bp
 prestin_isoform_X2_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
FPKM:32.66 TPM:25.05
2367 A_BomoASG_c13121_g1_i2
2291bp
 prestin_isoform_X2_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
FPKM:7.89 TPM:6.05
2368 A_BomoASG_c13121_g1_i3
2227bp
 prestin_isoform_X2_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
FPKM:13.20 TPM:10.13
2369 A_BomoASG_c13122_g1_i1
291bp
FPKM:1.28 TPM:0.98
2370 A_BomoASG_c13123_g1_i1
415bp
 uncharacterized_protein_LOC110378471,_partial_[Helicoverpa_armigera]
FPKM:1.81 TPM:1.39
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