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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1531 A_BomoASG_c12229_g1_i1
246bp
FPKM:4.39 TPM:3.36
1532 A_BomoASG_c1222_g1_i1
235bp
FPKM:1.41 TPM:1.08
1533 A_BomoASG_c12231_g1_i1
209bp
FPKM:1.97 TPM:1.51
1534 A_BomoASG_c12232_g1_i1
497bp
FPKM:1.89 TPM:1.45
1535 A_BomoASG_c12233_g1_i1
286bp
 PREDICTED:_uncharacterized_protein_LOC106720812_[Papilio_machaon]
FPKM:2.22 TPM:1.70
1536 A_BomoASG_c12234_g1_i1
358bp
FPKM:4.33 TPM:3.32
1537 A_BomoASG_c12235_g1_i1
233bp
 uncharacterized_protein_LOC105841590_[Bombyx_mori]
FPKM:5.77 TPM:4.42
1538 A_BomoASG_c12235_g2_i1
222bp
 uncharacterized_protein_LOC105841590_[Bombyx_mori]
FPKM:0.82 TPM:0.63
1539 A_BomoASG_c12236_g1_i1
218bp
FPKM:2.60 TPM:2.00
1540 A_BomoASG_c12237_g1_i1
231bp
FPKM:2.95 TPM:2.26
1541 A_BomoASG_c12238_g1_i1
282bp
FPKM:5.03 TPM:3.86
1542 A_BomoASG_c12239_g1_i1
466bp
 scavenger_receptor_class_B_member_1_[Bombyx_mori]
FPKM:1.32 TPM:1.01
1543 A_BomoASG_c1223_g1_i1
214bp
 uncharacterized_protein_LOC101744432_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0020002 C host cell plasma membrane
GO:0033644 C host cell membrane
GO:0039660 F structural constituent of virion
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.83 TPM:1.41
1544 A_BomoASG_c12241_g1_i1
478bp
FPKM:3.46 TPM:2.65
1545 A_BomoASG_c12242_g1_i1
515bp
FPKM:5.39 TPM:4.13
1546 A_BomoASG_c12243_g1_i1
499bp
 histone_H3.2_[Daphnia_magna]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0046982 F protein heterodimerization activity
FPKM:2.05 TPM:1.57
1547 A_BomoASG_c12246_g1_i1
338bp
FPKM:2.24 TPM:1.72
1548 A_BomoASG_c12250_g1_i1
523bp
FPKM:3.00 TPM:2.30
1549 A_BomoASG_c12251_g1_i1
416bp
FPKM:2.25 TPM:1.73
1550 A_BomoASG_c12252_g1_i1
290bp
FPKM:11.20 TPM:8.59
1551 A_BomoASG_c12253_g1_i1
2214bp
 cytochrome_c_oxidase_subunit_I,_partial_(mitochondrion)_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006119 P oxidative phosphorylation
GO:0009055 F electron transfer activity
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:1902600 P proton transmembrane transport
FPKM:2891.52 TPM:2217.91
1552 A_BomoASG_c12254_g1_i1
2105bp
 PREDICTED:_paired_box_protein_Pax-6-like_isoform_X1_[Papilio_polytes]
GO:0001655 P urogenital system development
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0039003 P pronephric field specification
GO:0039020 P pronephric nephron tubule development
GO:0042981 P regulation of apoptotic process
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048793 P pronephros development
GO:1900212 P negative regulation of mesenchymal cell apoptotic process involved in metanephros development
GO:1900218 P negative regulation of apoptotic process involved in metanephric nephron tubule development
GO:2000611 P positive regulation of thyroid hormone generation
FPKM:57.18 TPM:43.86
1553 A_BomoASG_c12254_g1_i2
2088bp
 PREDICTED:_paired_box_protein_Pax-6-like_isoform_X1_[Papilio_polytes]
GO:0001708 P cell fate specification
GO:0001822 P kidney development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007422 P peripheral nervous system development
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0021549 P cerebellum development
GO:0021588 P cerebellum formation
GO:0021703 P locus ceruleus development
GO:0030154 P cell differentiation
GO:0030878 P thyroid gland development
GO:0030901 P midbrain development
GO:0030902 P hindbrain development
GO:0030917 P midbrain-hindbrain boundary development
GO:0034672 P anterior/posterior pattern specification involved in pronephros development
GO:0035775 P pronephric glomerulus morphogenesis
GO:0043049 P otic placode formation
GO:0043565 F sequence-specific DNA binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0048793 P pronephros development
GO:0060113 P inner ear receptor cell differentiation
GO:0060118 P vestibular receptor cell development
GO:0072114 P pronephros morphogenesis
FPKM:21.33 TPM:16.36
1554 A_BomoASG_c12255_g1_i1
243bp
FPKM:2.59 TPM:1.98
1555 A_BomoASG_c12256_g1_i1
3049bp
 mucin-5AC_isoform_X1_[Bombyx_mori]
FPKM:196.84 TPM:150.99
1556 A_BomoASG_c12257_g1_i1
3812bp
 wing_disc-specific_protein_[Bombyx_mori]
FPKM:105.19 TPM:80.68
1557 A_BomoASG_c12258_g1_i1
887bp
FPKM:24.01 TPM:18.42
1558 A_BomoASG_c12259_g1_i1
820bp
 elongation_factor_1-beta'_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:870.53 TPM:667.73
1559 A_BomoASG_c1225_g1_i1
212bp
FPKM:1.89 TPM:1.45
1560 A_BomoASG_c12262_g1_i1
2084bp
 prefoldin_subunit_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0016272 C prefoldin complex
GO:0044183 F protein folding chaperone
GO:0051082 F unfolded protein binding
GO:0051495 P positive regulation of cytoskeleton organization
GO:0070062 C extracellular exosome
FPKM:38.67 TPM:29.66
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