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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1411 A_BomoASG_c12093_g1_i1
256bp
FPKM:0.57 TPM:0.44
1412 A_BomoASG_c12094_g1_i1
245bp
 uncharacterized_protein_LOC110385670_[Bombyx_mori]
FPKM:4.43 TPM:3.40
1413 A_BomoASG_c12095_g1_i1
374bp
 LOW_QUALITY_PROTEIN:_collagen_alpha-2(IV)_chain_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0030198 P extracellular matrix organization
GO:0046872 F metal ion binding
GO:0071300 P cellular response to retinoic acid
GO:0071310 P cellular response to organic substance
GO:0071873 P response to norepinephrine
GO:0097067 P cellular response to thyroid hormone stimulus
FPKM:2.41 TPM:1.85
1414 A_BomoASG_c12096_g1_i1
555bp
 p23-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0031965 C nuclear membrane
FPKM:188.70 TPM:144.74
1415 A_BomoASG_c12097_g1_i1
279bp
 protein_disks_lost_[Bombyx_mori]
FPKM:1.87 TPM:1.44
1416 A_BomoASG_c12098_g1_i1
868bp
 protein_FAM177A1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:34.06 TPM:26.12
1417 A_BomoASG_c12102_g1_i1
537bp
FPKM:2.46 TPM:1.89
1418 A_BomoASG_c12103_g1_i1
537bp
FPKM:1.85 TPM:1.42
1419 A_BomoASG_c12104_g1_i1
202bp
FPKM:2.20 TPM:1.69
1420 A_BomoASG_c12105_g1_i1
371bp
 serine/threonine-protein_kinase_ATR_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0046982 F protein heterodimerization activity
FPKM:64.14 TPM:49.20
1421 A_BomoASG_c12107_g1_i1
268bp
FPKM:1.02 TPM:0.78
1422 A_BomoASG_c12108_g1_i1
293bp
 uncharacterized_protein_LOC101740647_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.69 TPM:1.29
1423 A_BomoASG_c12109_g1_i1
748bp
FPKM:17.98 TPM:13.79
1424 A_BomoASG_c1210_g1_i1
283bp
 Trafficking_kinesin-binding_protein_milt_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
1425 A_BomoASG_c12110_g1_i1
364bp
 WD_repeat-containing_protein_mio_[Bombyx_mori]
FPKM:4.77 TPM:3.66
1426 A_BomoASG_c12111_g1_i1
246bp
 PREDICTED:_adenylate_kinase_9_isoform_X2_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
1427 A_BomoASG_c12112_g1_i1
224bp
FPKM:1.61 TPM:1.23
1428 A_BomoASG_c12113_g1_i1
460bp
 DNA_repair_protein_complementing_XP-A_cells_homolog_[Bombyx_mori]
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
FPKM:3.28 TPM:2.51
1429 A_BomoASG_c12114_g1_i1
696bp
 NADH_dehydrogenase_subunit_5_(mitochondrion)_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:117.90 TPM:90.44
1430 A_BomoASG_c12115_g1_i1
1755bp
 phosphoribosylaminoimidazole_carboxylase,_phosphoribosylaminoimidazole_succinocarboxamide_synthetase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002121 P inter-male aggressive behavior
GO:0003824 F catalytic activity
GO:0004638 F phosphoribosylaminoimidazole carboxylase activity
GO:0004639 F phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0016874 F ligase activity
GO:0046084 P adenine biosynthetic process
FPKM:41.42 TPM:31.77
1431 A_BomoASG_c12115_g1_i2
1624bp
 phosphoribosylaminoimidazole_carboxylase,_phosphoribosylaminoimidazole_succinocarboxamide_synthetase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002121 P inter-male aggressive behavior
GO:0003824 F catalytic activity
GO:0004638 F phosphoribosylaminoimidazole carboxylase activity
GO:0004639 F phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0016874 F ligase activity
GO:0046084 P adenine biosynthetic process
FPKM:20.68 TPM:15.86
1432 A_BomoASG_c12116_g1_i1
227bp
FPKM:0.77 TPM:0.59
1433 A_BomoASG_c12117_g1_i1
419bp
 myosin-IB_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
FPKM:1.11 TPM:0.85
1434 A_BomoASG_c12118_g1_i1
413bp
FPKM:53.01 TPM:40.66
1435 A_BomoASG_c12119_g1_i1
446bp
 gag_pol_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.61 TPM:0.46
1436 A_BomoASG_c1211_g1_i1
341bp
FPKM:1.57 TPM:1.21
1437 A_BomoASG_c12122_g1_i1
219bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.57 TPM:1.97
1438 A_BomoASG_c12123_g1_i1
336bp
FPKM:2.26 TPM:1.74
1439 A_BomoASG_c12125_g1_i1
338bp
FPKM:0.96 TPM:0.74
1440 A_BomoASG_c1212_g1_i1
319bp
 hypothetical_protein_RP20_CCG003969_[Aedes_albopictus]
GO:0002027 P regulation of heart rate
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005509 F calcium ion binding
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006887 P exocytosis
GO:0006914 P autophagy
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007602 P phototransduction
GO:0007619 P courtship behavior
GO:0007632 P visual behavior
GO:0008331 F high voltage-gated calcium channel activity
GO:0008332 F low voltage-gated calcium channel activity
GO:0008344 P adult locomotory behavior
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016057 P regulation of membrane potential in photoreceptor cell
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042045 P epithelial fluid transport
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
GO:0048786 C presynaptic active zone
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055085 P transmembrane transport
GO:0070050 P neuron cellular homeostasis
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0097352 P autophagosome maturation
FPKM:1.78 TPM:1.37
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