SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c12095_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_collagen_alpha-2(IV)_chain_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0030198 P extracellular matrix organization
GO:0046872 F metal ion binding
GO:0071300 P cellular response to retinoic acid
GO:0071310 P cellular response to organic substance
GO:0071873 P response to norepinephrine
GO:0097067 P cellular response to thyroid hormone stimulus
Transcript
Level		FPKM:2.41 TPM:1.85
ORF EntryO_BomoASG1867_internal:A_BomoASG_c12095_g1_i1
Sequence
(Nucleotide)
AGGAAATGCAGGTGAAATAGGTTTTGCCATTAGTCCCAAGGGCCAACCTGGATATCCGGG
TTTGGCTGGTTACAATGGATTAAAAGGTGAAAAAGGTACAATCGGAGAAACTGGAAGAAT
TGGAATTTACGGAGAACAAGGCTTAGTCGGGGTCAAAGGAGAGACAGGCGACGAAGGTGA
AGCTGGATTCATCGGACCCCCCGGTCTACAAGGAATAGAAGGAGACAAAGGAGATACTCT
GCTTCCATCAGATATTTTACCTGGACAACCTGGTGATGTTGGATTGCCAGGATTTGATGG
ACGGGATGGTGTAGCAGGAATCCCAGGGTCTTTTGGTCGAAATGGTTACCTGGGTGTCAA
AGGGCAAAGGGGAG
(374 bp)

- SilkBase 1999-2023 -