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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
361 A_TrvaFAMAMG_TR10282c0_g1_i1
4452bp
A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008201 F heparin binding
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010573 P vascular endothelial growth factor production
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0032964 P collagen biosynthetic process
GO:0043206 P supramolecular fiber organization
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
FPKM:1.47 TPM:1.44
362 A_TrvaFAMAMG_TR10283c0_g1_i1
737bp
PREDICTED:_ras-related_protein_Rap-2b_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001963 P synaptic transmission, dopaminergic
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031397 P negative regulation of protein ubiquitination
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0031681 F G-protein beta-subunit binding
GO:0033235 P positive regulation of protein sumoylation
GO:0043949 P regulation of cAMP-mediated signaling
GO:0051897 P positive regulation of protein kinase B signaling
FPKM:0.58 TPM:0.57
363 A_TrvaFAMAMG_TR10283c1_g1_i1
230bp
PREDICTED:_ras-related_protein_Rap-2b_[Bombyx_mori]
FPKM:0.44 TPM:0.43
364 A_TrvaFAMAMG_TR10284c0_g1_i1
561bp
PREDICTED:_N-alpha-acetyltransferase_38-B,_NatC_auxiliary_subunit_[Plutella_xylostella]
GO:0005737 C cytoplasm
FPKM:39.55 TPM:38.75
365 A_TrvaFAMAMG_TR10285c0_g1_i1
940bp
PREDICTED:_uncharacterized_protein_LOC101744009_isoform_X1_[Bombyx_mori]
FPKM:0.82 TPM:0.81
366 A_TrvaFAMAMG_TR10286c0_g1_i1
1897bp
PREDICTED:_uncharacterized_protein_LOC106117228_isoform_X2_[Papilio_xuthus]
GO:0005375 F copper ion transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
FPKM:9.41 TPM:9.22
367 A_TrvaFAMAMG_TR10286c0_g2_i1
1898bp
PREDICTED:_uncharacterized_protein_LOC106117228_isoform_X2_[Papilio_xuthus]
GO:0005375 F copper ion transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
FPKM:1.78 TPM:1.74
368 A_TrvaFAMAMG_TR10286c1_g1_i1
387bp
FPKM:0.53 TPM:0.52
369 A_TrvaFAMAMG_TR10287c0_g1_i1
4466bp
Endoprotease_FURIN_[Spodoptera_frugiperda]
GO:0004252 F serine-type endopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0051048 P negative regulation of secretion
FPKM:12.06 TPM:11.82
370 A_TrvaFAMAMG_TR10287c0_g2_i1
4467bp
Endoprotease_FURIN_[Spodoptera_frugiperda]
GO:0004252 F serine-type endopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0051048 P negative regulation of secretion
FPKM:1.19 TPM:1.16
371 A_TrvaFAMAMG_TR10288c0_g1_i1
236bp
predicted_protein_[Nematostella_vectensis]
FPKM:1.17 TPM:1.15
372 A_TrvaFAMAMG_TR10288c0_g2_i1
588bp
FPKM:0.48 TPM:0.47
373 A_TrvaFAMAMG_TR10289c0_g1_i1
227bp
AMP-dependent_synthetase_[Xenorhabdus_griffiniae]
FPKM:1.95 TPM:1.91
374 A_TrvaFAMAMG_TR10289c0_g2_i1
224bp
FPKM:0.02 TPM:0.02
375 A_TrvaFAMAMG_TR1028c0_g1_i1
291bp
hypothetical_protein_[Pseudobacteroides_cellulosolvens]
FPKM:0.91 TPM:0.89
376 A_TrvaFAMAMG_TR10290c0_g1_i1
2741bp
Pre-mRNA-splicing_factor_SYF1_[Papilio_xuthus]
GO:0000349 P generation of catalytic spliceosome for first transesterification step
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0001824 P blastocyst development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0021987 P cerebral cortex development
GO:0071010 C prespliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
FPKM:1.09 TPM:1.07
377 A_TrvaFAMAMG_TR10290c0_g2_i1
2740bp
PREDICTED:_pre-mRNA-splicing_factor_SYF1_[Amyelois_transitella]
GO:0000349 P generation of catalytic spliceosome for first transesterification step
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0001824 P blastocyst development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0021987 P cerebral cortex development
GO:0071010 C prespliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
FPKM:3.87 TPM:3.79
378 A_TrvaFAMAMG_TR10291c0_g1_i1
2326bp
PREDICTED:_histone_deacetylase_3_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0017053 C transcription repressor complex
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070491 F DNA-binding transcription factor binding
GO:0070932 P histone H3 deacetylation
FPKM:13.10 TPM:12.84
379 A_TrvaFAMAMG_TR10292c0_g1_i1
446bp
PREDICTED:_uncharacterized_protein_LOC106128478_isoform_X2_[Papilio_xuthus]
FPKM:0.66 TPM:0.65
380 A_TrvaFAMAMG_TR10292c2_g1_i1
303bp
PREDICTED:_uncharacterized_protein_LOC105382953_[Plutella_xylostella]
FPKM:0.45 TPM:0.45
381 A_TrvaFAMAMG_TR10293c0_g1_i1
898bp
hypothetical_protein_RR46_02974_[Papilio_xuthus]
FPKM:1.34 TPM:1.31
382 A_TrvaFAMAMG_TR10293c0_g2_i1
856bp
hypothetical_protein_RR46_02974_[Papilio_xuthus]
FPKM:4.50 TPM:4.41
383 A_TrvaFAMAMG_TR10294c0_g1_i1
1581bp
Cytoplasmic_protein_NCK1_[Papilio_xuthus]
GO:0000164 C protein phosphatase type 1 complex
GO:0004860 F protein kinase inhibitor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005802 C trans-Golgi network
GO:0005840 C ribosome
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006417 P regulation of translation
GO:0006469 P negative regulation of protein kinase activity
GO:0006930 P substrate-dependent cell migration, cell extension
GO:0007015 P actin filament organization
GO:0010976 P positive regulation of neuron projection development
GO:0012506 C vesicle membrane
GO:0016192 P vesicle-mediated transport
GO:0016477 P cell migration
GO:0019904 F protein domain specific binding
GO:0030032 P lamellipodium assembly
GO:0030334 P regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0030971 F receptor tyrosine kinase binding
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0036493 P positive regulation of translation in response to endoplasmic reticulum stress
GO:0042102 P positive regulation of T cell proliferation
GO:0042110 P T cell activation
GO:0043547 P positive regulation of GTPase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0051707 P response to other organism
GO:0060548 P negative regulation of cell death
GO:0070262 P peptidyl-serine dephosphorylation
GO:0071074 F eukaryotic initiation factor eIF2 binding
GO:1902237 P positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:1903676 P positive regulation of cap-dependent translational initiation
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1903898 P negative regulation of PERK-mediated unfolded protein response
GO:1903912 P negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
GO:1904030 P negative regulation of cyclin-dependent protein kinase activity
GO:1990441 P negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
FPKM:2.01 TPM:1.97
384 A_TrvaFAMAMG_TR10295c0_g1_i1
421bp
FPKM:1.36 TPM:1.33
385 A_TrvaFAMAMG_TR10296c0_g1_i1
363bp
PREDICTED:_protein_lethal(2)denticleless_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0022008 P neurogenesis
GO:0051726 P regulation of cell cycle
FPKM:0.60 TPM:0.58
386 A_TrvaFAMAMG_TR10296c1_g1_i1
573bp
PREDICTED:_protein_lethal(2)denticleless_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0022008 P neurogenesis
GO:0051726 P regulation of cell cycle
FPKM:1.00 TPM:0.98
387 A_TrvaFAMAMG_TR10296c2_g1_i1
378bp
hypothetical_protein_KGM_09055_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0022008 P neurogenesis
GO:0051726 P regulation of cell cycle
FPKM:0.76 TPM:0.74
388 A_TrvaFAMAMG_TR10297c0_g1_i1
332bp
PREDICTED:_solute_carrier_family_22_member_1_[Bombyx_mori]
FPKM:0.25 TPM:0.25
389 A_TrvaFAMAMG_TR10297c0_g2_i1
392bp
PREDICTED:_solute_carrier_family_22_member_1_[Bombyx_mori]
FPKM:0.43 TPM:0.42
390 A_TrvaFAMAMG_TR10298c0_g1_i1
366bp
FPKM:1.33 TPM:1.31
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