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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_TrvaFAMAMG_TR10266c0_g2_i1
1799bp
FPKM:0.32 TPM:0.31
332 A_TrvaFAMAMG_TR10267c0_g1_i1
753bp
FPKM:5.41 TPM:5.30
333 A_TrvaFAMAMG_TR10267c0_g2_i1
684bp
FPKM:0.30 TPM:0.29
334 A_TrvaFAMAMG_TR10268c0_g1_i1
448bp
PREDICTED:_NEDD8_ultimate_buster_1_isoform_X2_[Bombyx_mori]
FPKM:0.12 TPM:0.12
335 A_TrvaFAMAMG_TR10268c0_g2_i1
503bp
PREDICTED:_NEDD8_ultimate_buster_1_isoform_X2_[Bombyx_mori]
FPKM:0.08 TPM:0.07
336 A_TrvaFAMAMG_TR10268c0_g3_i1
1960bp
PREDICTED:_NEDD8_ultimate_buster_1_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
FPKM:2.48 TPM:2.43
337 A_TrvaFAMAMG_TR10269c0_g1_i1
252bp
PREDICTED:_tektin-B1-like_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0030030 P cell projection organization
GO:0030317 P flagellated sperm motility
GO:0031514 C motile cilium
GO:0036159 P inner dynein arm assembly
GO:0042995 C cell projection
FPKM:0.34 TPM:0.34
338 A_TrvaFAMAMG_TR1026c0_g1_i1
578bp
E1_[Tursiops_truncatus_papillomavirus_6]
FPKM:0.72 TPM:0.71
339 A_TrvaFAMAMG_TR10270c0_g1_i1
941bp
hypothetical_protein_RR46_03427_[Papilio_xuthus]
FPKM:1.25 TPM:1.23
340 A_TrvaFAMAMG_TR10270c0_g2_i1
1234bp
hypothetical_protein_RR46_03427_[Papilio_xuthus]
FPKM:1.43 TPM:1.40
341 A_TrvaFAMAMG_TR10271c0_g1_i1
2090bp
PREDICTED:_angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
FPKM:6.02 TPM:5.90
342 A_TrvaFAMAMG_TR10271c0_g2_i1
792bp
hypothetical_protein_KGM_17315_[Danaus_plexippus]
FPKM:0.43 TPM:0.42
343 A_TrvaFAMAMG_TR10271c0_g3_i1
440bp
PREDICTED:_angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0004483 F mRNA (nucleoside-2'-O-)-methyltransferase activity
GO:0005634 C nucleus
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0080009 P mRNA methylation
GO:0097309 P cap1 mRNA methylation
FPKM:3.02 TPM:2.96
344 A_TrvaFAMAMG_TR10272c0_g1_i1
607bp
FPKM:5.18 TPM:5.08
345 A_TrvaFAMAMG_TR10272c0_g2_i1
287bp
FPKM:1.34 TPM:1.31
346 A_TrvaFAMAMG_TR10273c0_g1_i1
3707bp
muscle_glycogen_phosphorylase_[Bombyx_mori]
GO:0004645 F 1,4-alpha-oligoglucan phosphorylase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005980 P glycogen catabolic process
GO:0008184 F glycogen phosphorylase activity
GO:0008340 P determination of adult lifespan
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030170 F pyridoxal phosphate binding
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0045819 P positive regulation of glycogen catabolic process
GO:0045824 P negative regulation of innate immune response
GO:0050829 P defense response to Gram-negative bacterium
GO:0060361 P flight
FPKM:25.00 TPM:24.49
347 A_TrvaFAMAMG_TR10274c0_g1_i1
1173bp
FPKM:2.46 TPM:2.41
348 A_TrvaFAMAMG_TR10274c0_g2_i1
307bp
FPKM:1.33 TPM:1.31
349 A_TrvaFAMAMG_TR10275c0_g1_i1
313bp
PREDICTED:_myosin-2_essential_light_chain_isoform_X1_[Vollenhovia_emeryi]
FPKM:0.00 TPM:0.00
350 A_TrvaFAMAMG_TR10275c0_g2_i1
431bp
myosin-2_essential_light_chain_[Papilio_polytes]
FPKM:0.94 TPM:0.92
351 A_TrvaFAMAMG_TR10275c0_g2_i2
514bp
AAEL012446-PA_[Aedes_aegypti]
FPKM:0.38 TPM:0.37
352 A_TrvaFAMAMG_TR10276c0_g1_i1
538bp
Uncharacterized_protein_OBRU01_09601_[Operophtera_brumata]
FPKM:1.50 TPM:1.47
353 A_TrvaFAMAMG_TR10277c0_g1_i1
410bp
FPKM:4.86 TPM:4.77
354 A_TrvaFAMAMG_TR10278c0_g1_i1
249bp
FPKM:0.25 TPM:0.24
355 A_TrvaFAMAMG_TR10278c0_g2_i1
1138bp
PREDICTED:_endonuclease_G,_mitochondrial,_partial_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005739 C mitochondrion
GO:0006309 P apoptotic DNA fragmentation
GO:0006401 P RNA catabolic process
GO:0006915 P apoptotic process
GO:0016787 F hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:10.98 TPM:10.76
356 A_TrvaFAMAMG_TR10278c0_g3_i1
1023bp
PREDICTED:_endonuclease_G,_mitochondrial,_partial_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005739 C mitochondrion
GO:0006309 P apoptotic DNA fragmentation
GO:0006401 P RNA catabolic process
GO:0006915 P apoptotic process
GO:0016787 F hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.78 TPM:1.74
357 A_TrvaFAMAMG_TR10279c0_g1_i1
6186bp
PREDICTED:_transcription_elongation_factor_SPT6_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0030707 P ovarian follicle cell development
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
GO:0035327 C euchromatin
GO:0035363 C histone locus body
FPKM:10.28 TPM:10.08
358 A_TrvaFAMAMG_TR1027c0_g1_i1
337bp
FPKM:1.48 TPM:1.45
359 A_TrvaFAMAMG_TR10280c0_g1_i1
355bp
FPKM:0.34 TPM:0.33
360 A_TrvaFAMAMG_TR10281c0_g1_i1
330bp
hypothetical_protein_RR48_00058_[Papilio_machaon]
FPKM:0.64 TPM:0.63
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