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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
901 A_BomoN4EE_TR100531_c1_g2_i1
243bp
 PREDICTED:_uncharacterized_protein_LOC101851717_[Aplysia_californica]
FPKM:0.48 TPM:0.64
902 A_BomoN4EE_TR100531_c1_g2_i2
4877bp
 PREDICTED:_balbiani_ring_protein_3_isoform_X2_[Bombyx_mori]
GO:0005102 F signaling receptor binding
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006590 P thyroid hormone generation
GO:0009268 P response to pH
GO:0015705 P iodide transport
GO:0030878 P thyroid gland development
GO:0031641 P regulation of myelination
GO:0032403 F protein-containing complex binding
GO:0032496 P response to lipopolysaccharide
GO:0042403 P thyroid hormone metabolic process
GO:0042446 P hormone biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0043168 F anion binding
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0048471 C perinuclear region of cytoplasm
GO:0051087 F chaperone binding
GO:0052689 F carboxylic ester hydrolase activity
FPKM:1.05 TPM:1.40
903 A_BomoN4EE_TR100532_c0_g1_i1
2369bp
 PREDICTED:_dihydropyrimidinase_isoform_X1_[Bombyx_mori]
GO:0002058 F uracil binding
GO:0002059 F thymine binding
GO:0004157 F dihydropyrimidinase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006208 P pyrimidine nucleobase catabolic process
GO:0006210 P thymine catabolic process
GO:0006212 P uracil catabolic process
GO:0008270 F zinc ion binding
GO:0016597 F amino acid binding
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019482 P beta-alanine metabolic process
GO:0019860 P uracil metabolic process
GO:0046135 P pyrimidine nucleoside catabolic process
GO:0046872 F metal ion binding
GO:0051219 F phosphoprotein binding
GO:0051260 P protein homooligomerization
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
FPKM:27.70 TPM:36.90
904 A_BomoN4EE_TR100533_c0_g1_i1
1846bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_proteasome_activator_complex_subunit_3_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0002039 F p53 binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008537 C proteasome activator complex
GO:0010950 P positive regulation of endopeptidase activity
GO:0016020 C membrane
GO:0042802 F identical protein binding
GO:0061133 F endopeptidase activator activity
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0097371 F MDM2/MDM4 family protein binding
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:29.19 TPM:38.89
905 A_BomoN4EE_TR100533_c0_g2_i1
1936bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_proteasome_activator_complex_subunit_3_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0002039 F p53 binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008537 C proteasome activator complex
GO:0010950 P positive regulation of endopeptidase activity
GO:0016020 C membrane
GO:0042802 F identical protein binding
GO:0061133 F endopeptidase activator activity
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0097371 F MDM2/MDM4 family protein binding
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:37.70 TPM:50.22
906 A_BomoN4EE_TR100533_c0_g3_i1
1956bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_proteasome_activator_complex_subunit_3_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0002039 F p53 binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008537 C proteasome activator complex
GO:0010950 P positive regulation of endopeptidase activity
GO:0016020 C membrane
GO:0042802 F identical protein binding
GO:0061133 F endopeptidase activator activity
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0097371 F MDM2/MDM4 family protein binding
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:5.28 TPM:7.04
907 A_BomoN4EE_TR100533_c0_g3_i2
2046bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_proteasome_activator_complex_subunit_3_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0002039 F p53 binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008537 C proteasome activator complex
GO:0010950 P positive regulation of endopeptidase activity
GO:0016020 C membrane
GO:0042802 F identical protein binding
GO:0061133 F endopeptidase activator activity
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0097371 F MDM2/MDM4 family protein binding
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:21.89 TPM:29.16
908 A_BomoN4EE_TR100533_c0_g4_i1
1899bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_proteasome_activator_complex_subunit_3_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0002039 F p53 binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008537 C proteasome activator complex
GO:0010950 P positive regulation of endopeptidase activity
GO:0016020 C membrane
GO:0042802 F identical protein binding
GO:0061133 F endopeptidase activator activity
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0097371 F MDM2/MDM4 family protein binding
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:44.03 TPM:58.65
909 A_BomoN4EE_TR100534_c0_g1_i1
228bp
 hypothetical_protein_GALMADRAFT_148721_[Galerina_marginata_CBS_339.88]
FPKM:4.79 TPM:6.38
910 A_BomoN4EE_TR100534_c0_g2_i1
227bp
 hypothetical_protein_DQ04_09681000_[Trypanosoma_grayi]
FPKM:1.83 TPM:2.43
911 A_BomoN4EE_TR100535_c0_g1_i1
2593bp
 PREDICTED:_serine/threonine-protein_kinase_greatwall_isoform_X1_[Amyelois_transitella]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0032154 C cleavage furrow
GO:0034048 P negative regulation of phosphoprotein phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0051301 P cell division
GO:0051721 F protein phosphatase 2A binding
FPKM:4.24 TPM:5.65
912 A_BomoN4EE_TR100535_c0_g2_i1
2560bp
 PREDICTED:_serine/threonine-protein_kinase_greatwall_isoform_X2_[Amyelois_transitella]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0032154 C cleavage furrow
GO:0034048 P negative regulation of phosphoprotein phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0051301 P cell division
GO:0051721 F protein phosphatase 2A binding
FPKM:16.74 TPM:22.29
913 A_BomoN4EE_TR100535_c0_g3_i1
1209bp
 PREDICTED:_serine/threonine-protein_kinase_greatwall_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0032154 C cleavage furrow
GO:0034048 P negative regulation of phosphoprotein phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0051301 P cell division
GO:0051721 F protein phosphatase 2A binding
FPKM:0.30 TPM:0.41
914 A_BomoN4EE_TR100536_c0_g1_i1
1249bp
 PREDICTED:_uncharacterized_protein_LOC101737983_isoform_X5_[Bombyx_mori]
FPKM:4.29 TPM:5.72
915 A_BomoN4EE_TR100536_c0_g2_i1
1066bp
 PREDICTED:_uncharacterized_protein_LOC101737983_isoform_X6_[Bombyx_mori]
FPKM:1.98 TPM:2.64
916 A_BomoN4EE_TR100536_c1_g1_i1
856bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.13 TPM:0.17
917 A_BomoN4EE_TR100537_c0_g1_i1
3193bp
 PREDICTED:_chromatin_assembly_factor_1_subunit_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031497 P chromatin assembly
GO:0033186 C CAF-1 complex
FPKM:0.54 TPM:0.72
918 A_BomoN4EE_TR100537_c0_g2_i1
3192bp
 PREDICTED:_chromatin_assembly_factor_1_subunit_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031497 P chromatin assembly
GO:0033186 C CAF-1 complex
FPKM:32.03 TPM:42.67
919 A_BomoN4EE_TR100538_c0_g1_i1
330bp
 PREDICTED:_uncharacterized_protein_LOC105842586_isoform_X2_[Bombyx_mori]
FPKM:0.53 TPM:0.71
920 A_BomoN4EE_TR100538_c0_g2_i1
1140bp
 PREDICTED:_uncharacterized_protein_LOC105842586_isoform_X1_[Bombyx_mori]
FPKM:0.21 TPM:0.27
921 A_BomoN4EE_TR100538_c0_g3_i1
1299bp
 PREDICTED:_uncharacterized_protein_LOC105842586_isoform_X1_[Bombyx_mori]
FPKM:0.33 TPM:0.44
922 A_BomoN4EE_TR100539_c0_g1_i1
2336bp
 PREDICTED:_vinculin_[Papilio_polytes]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
FPKM:7.95 TPM:10.60
923 A_BomoN4EE_TR10053_c0_g1_i1
383bp
FPKM:0.00 TPM:0.00
924 A_BomoN4EE_TR100540_c0_g1_i1
743bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X2_[Papilio_machaon]
FPKM:5.70 TPM:7.59
925 A_BomoN4EE_TR100540_c0_g2_i1
423bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Papilio_machaon]
FPKM:0.45 TPM:0.60
926 A_BomoN4EE_TR100541_c0_g1_i1
1392bp
 PREDICTED:_protein_lethal(2)denticleless_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0022008 P neurogenesis
GO:0051726 P regulation of cell cycle
FPKM:27.18 TPM:36.20
927 A_BomoN4EE_TR100541_c1_g1_i1
1519bp
 PREDICTED:_protein_lethal(2)denticleless-like_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0022008 P neurogenesis
GO:0051726 P regulation of cell cycle
FPKM:50.57 TPM:67.36
928 A_BomoN4EE_TR100542_c0_g1_i1
647bp
FPKM:0.96 TPM:1.28
929 A_BomoN4EE_TR100542_c0_g1_i2
3615bp
 PREDICTED:_TATA_element_modulatory_factor_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001675 P acrosome assembly
GO:0001819 P positive regulation of cytokine production
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007286 P spermatid development
GO:0007289 P spermatid nucleus differentiation
GO:0008584 P male gonad development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0030317 P flagellated sperm motility
GO:0032275 P luteinizing hormone secretion
GO:0033327 P Leydig cell differentiation
GO:0042742 P defense response to bacterium
GO:0043066 P negative regulation of apoptotic process
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0071407 P cellular response to organic cyclic compound
GO:2000845 P positive regulation of testosterone secretion
FPKM:1.11 TPM:1.48
930 A_BomoN4EE_TR100542_c0_g1_i3
4199bp
 PREDICTED:_TATA_element_modulatory_factor_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001675 P acrosome assembly
GO:0001819 P positive regulation of cytokine production
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007286 P spermatid development
GO:0007289 P spermatid nucleus differentiation
GO:0008584 P male gonad development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0030317 P flagellated sperm motility
GO:0032275 P luteinizing hormone secretion
GO:0033327 P Leydig cell differentiation
GO:0042742 P defense response to bacterium
GO:0043066 P negative regulation of apoptotic process
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0071407 P cellular response to organic cyclic compound
GO:2000845 P positive regulation of testosterone secretion
FPKM:14.04 TPM:18.71
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