SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100539_c0_g1_i1
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_vinculin_[Papilio_polytes]
Ontology
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
Transcript
Level		FPKM:7.95 TPM:10.60
ORF EntryO_BomoN4EE51115_complete:A_BomoN4EE_TR100539_c0_g1_i1
Sequence
(Nucleotide)
GGGGGAGGGGGTGGCGGGGGCGGGGGCGCGTAGTGCTGCCCCAGTGCTGATTCCATTTCG
CTCGCTGCTTTAATTATCTCTGCGTTGGCGGCCCTCCAGTGCGGCAGCTGCGCGCGGTCG
GCCTGCGCCACGCCCTTGGCCCTGCGCACGGCGGCGGGGATGGCGGCCTGCAGGCGGCGG
TGGGCGGCGTCCAGCGCGCGGGCGAACTCGCCGTCCTCCGTGTTGTCGCGCTCCGACCCG
CCCACCAGCAGCACGCGGTTGGCCAGCCTGGCTATAGCCGAAGTGTTATCCACCATCTTC
TGCGAGTCGTTGTTGCGGATGGCGTCCTCGCACAGGTACGTGTGCTTCTGCATCAGCTCG
CCGGCGGTCCTGACGAAGTCCAGGGGGTCGACGGCCTGGTCGCACAGGTCCCGCACCCGC
AACACCGCCTCCGAGTACTGCCCCTTCAGGTTGTCGAAGTGTTCCTCCGCCACCTTGCTG
TCCGGGTTGTAGAACCGGATTTTACCAGCCGCGATAACTTGAGGCGAGAGCTTCTCCACC
TGCGCGGCGTAGTGCAGCAGCTGGTCGGCGAGCCGCTTGTGGTGCCCCGCGCCCGCGGCC
ACGGTGCGCGCGGCGGCGGCGGCGCGCCCGCTAAACGCTCGCAGGGCGGCCGCGCGCTGC
TGCAGCTCGGCCTCGCGACCCGCCGCGCCGGGCGGCGCGGCGACGGCGTCGCTGTAGTGC
CGCAGCGGCGCGGCGACGTCGATGAACTCCTCGACCACGCGGTTGACCACTGCGCGCTCC
GTGGCGCCGCGCAGCGCGTGCAGCTTGTCCGTCAGCTCCCTGGTGAGAGCCCTGGCCTCG
TCGGAGTCCCCCCGGCCCGCGGCGCACAGCTCGGCCAGGCGGTCGGCCAGCCGCTGCACC
TCGCCGCACTGCTGCAGCACCTCCGCCTTCTCGCGACCCTGCAGCCCGTCCGCGATCCTC
TGGCCTTGCGAGACGATGCTATTGATCGCCTTTTGGCCTTCAACCCTGGTGACCGCATCC
GCAGCCGGATGGAGAAGCCACTTGTGGGCCGTTTCCAATCTGGCCTGCATAGTCCTCCCT
CCCTGCTTCTCCACAGCCCTCACGCCCTCGTTGACGGTTCCCTCCAGCTCGTTGAGTTGC
GTGCCCAACTCTGCAGCTAGCTTCAAAGCCTTGTGGTCCCGGCCGCGCCCGGCCTGGCGC
TCGTCGCACAGCTGGTCCGCGTTGTAGCCCCCGGACCTGACGCGCGCGGCGACTGCGTCG
GCGGGCGCGGGCGGCAGGTGCTCGGCGGCGCGCTGGGCCGACGTGAGCACGGAGCGCAGG
GCTCGCTCGCCGGAGCTGTTGCGCAGCGCCGCCGCGTCATTCAAAAACTCATGTGCAGCG
CCTATCTTGGTGTGTATCTGACTTTGGAGAGCTTTAAGCACGGTGATGTTGTCCTTCTCG
CCGCCGTCCTCCACGTACGACGTCAGCTGTAGGACCCTGATGATCTCGTGGATCTCATCC
GCCATCCTCTGCGCCAGGTAGTTCCTGTTCTCGGCGGCTTCTTCCATGCCTTTGCCGCCC
TCGGTGAGGATGTGTATGTATATCTTCATGGAGCAGATGAGCACGGGCGCGAGCTGCTTG
ACGCTCTCCAGGCACTGCGTGAGGATCTCGGCGTGAGGGGGATGGGTCAGCTCCGAAGCG
CGGGCCGCCACCTCTCTGGCCGCCCTGGAGAGCGCCGGCGAGATGTCCCTCAGGAACTGA
ACCAAGTCCTCCATCGTGTCTATCACCTCGGCAACTCCGAGGTAATCTAGAACCTTCTTG
CATTCTTTGACAATCTTTCTGACTTCGGACTCGTCGAAACAGAGGAGCAACGCCGATGTA
CCCTGCAGGATGCCGCGGGACCCTTCGATCAGCTTCTTCCTAGCGGGCCCCGAATACGGA
TCAGCTCTGAGCATATCAGAGGCCTGCTGCAGCAGGGTGGCTGCCGTCTCCACGCGGTGT
AGGGCCCCCGGCATGTCGTGCCGCAGGATCGCATCGTCTGATGACTCAATGGTCTCGTGG
CCAACCTTGACGAGGTTGTTGACGGCAAGGGAGACGGCCTGCACAGGACGAGCCAAGTCC
GGCATAGCGTTGCCATCTTCTGCTTCTTCATGGAGGATGACCAGTCGTGACACCTGCTGA
GCGACTGGCTCTAGAATGCTTTCGATAATTTTCGTGTGGAACACAGGCATCTTGCTGATC
ACTTATTTACATTAGAATAAAAACAAAAAAATCACAAACAACCACGAAATAAAGCCAACT
AAGCCAATGAACCAGAGAGGCACTAACAAACTGAGACGTAATATTATTAATACCTG
(2336 bp)

- SilkBase 1999-2023 -