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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
631 A_BomoN4EE_TR100374_c0_g1_i1
480bp
 PREDICTED:_glutamine_synthetase-like,_partial_[Rhinopithecus_roxellana]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004351 F glutamate decarboxylase activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006542 P glutamine biosynthetic process
GO:0006807 P nitrogen compound metabolic process
GO:0016829 F lyase activity
GO:0016874 F ligase activity
FPKM:0.33 TPM:0.43
632 A_BomoN4EE_TR100374_c0_g2_i1
1145bp
 PREDICTED:_glutamine_synthetase_2_cytoplasmic_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006538 P glutamate catabolic process
GO:0006542 P glutamine biosynthetic process
GO:0006807 P nitrogen compound metabolic process
GO:0007416 P synapse assembly
GO:0016874 F ligase activity
GO:0045213 P neurotransmitter receptor metabolic process
FPKM:0.48 TPM:0.64
633 A_BomoN4EE_TR100374_c0_g3_i1
1379bp
 PREDICTED:_glutamine_synthetase_2_cytoplasmic_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006538 P glutamate catabolic process
GO:0006542 P glutamine biosynthetic process
GO:0006807 P nitrogen compound metabolic process
GO:0007416 P synapse assembly
GO:0016874 F ligase activity
GO:0045213 P neurotransmitter receptor metabolic process
FPKM:5.92 TPM:7.88
634 A_BomoN4EE_TR100375_c0_g1_i1
736bp
 PREDICTED:_coiled-coil_domain-containing_protein_47_isoform_X2_[Bombyx_mori]
FPKM:0.91 TPM:1.21
635 A_BomoN4EE_TR100375_c0_g2_i1
737bp
 PREDICTED:_coiled-coil_domain-containing_protein_47_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
636 A_BomoN4EE_TR100376_c0_g1_i1
1240bp
 olfactory_receptor_[Bombyx_mori]
FPKM:9.36 TPM:12.47
637 A_BomoN4EE_TR100377_c0_g1_i1
570bp
 PREDICTED:_kinesin-like_protein_KIF16B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016887 F ATP hydrolysis activity
GO:0030705 P cytoskeleton-dependent intracellular transport
GO:0051225 P spindle assembly
FPKM:2.23 TPM:2.97
638 A_BomoN4EE_TR100377_c1_g1_i1
428bp
FPKM:0.49 TPM:0.66
639 A_BomoN4EE_TR100378_c0_g1_i1
264bp
 DNA_topoisomerase_I_[Melioribacter_roseus]
FPKM:0.37 TPM:0.49
640 A_BomoN4EE_TR100378_c1_g1_i1
229bp
 PREDICTED:_ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
641 A_BomoN4EE_TR100379_c0_g1_i1
229bp
FPKM:1.77 TPM:2.36
642 A_BomoN4EE_TR100379_c1_g1_i1
392bp
FPKM:0.44 TPM:0.58
643 A_BomoN4EE_TR10037_c0_g1_i1
356bp
FPKM:0.18 TPM:0.23
644 A_BomoN4EE_TR100380_c0_g1_i1
1115bp
 PREDICTED:_serine-threonine_kinase_receptor-associated_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000387 P spliceosomal snRNP assembly
GO:0005102 F signaling receptor binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010633 P negative regulation of epithelial cell migration
GO:0010719 P negative regulation of epithelial to mesenchymal transition
GO:0030277 P maintenance of gastrointestinal epithelium
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
FPKM:1.97 TPM:2.63
645 A_BomoN4EE_TR100380_c0_g2_i1
1482bp
 PREDICTED:_serine-threonine_kinase_receptor-associated_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000387 P spliceosomal snRNP assembly
GO:0005102 F signaling receptor binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010633 P negative regulation of epithelial cell migration
GO:0010719 P negative regulation of epithelial to mesenchymal transition
GO:0030277 P maintenance of gastrointestinal epithelium
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
FPKM:63.81 TPM:84.99
646 A_BomoN4EE_TR100380_c1_g1_i1
977bp
 PREDICTED:_MAP/microtubule_affinity-regulating_kinase_4-like_isoform_X1_[Papilio_polytes]
FPKM:1.36 TPM:1.81
647 A_BomoN4EE_TR100380_c1_g1_i2
486bp
 PREDICTED:_MAP/microtubule_affinity-regulating_kinase_4-like_isoform_X2_[Papilio_polytes]
FPKM:0.51 TPM:0.68
648 A_BomoN4EE_TR100380_c1_g2_i1
245bp
 PREDICTED:_seipin-like_[Limulus_polyphemus]
FPKM:0.47 TPM:0.62
649 A_BomoN4EE_TR100381_c0_g1_i1
1841bp
FPKM:1.92 TPM:2.55
650 A_BomoN4EE_TR100381_c1_g1_i1
664bp
FPKM:1.48 TPM:1.97
651 A_BomoN4EE_TR100382_c1_g1_i1
343bp
 phosphorylase_[Azospirillum_sp._CAG:239]
FPKM:0.76 TPM:1.02
652 A_BomoN4EE_TR100383_c0_g1_i1
263bp
FPKM:1.50 TPM:2.00
653 A_BomoN4EE_TR100383_c1_g1_i1
592bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:0.65 TPM:0.87
654 A_BomoN4EE_TR100384_c0_g1_i1
443bp
FPKM:1.16 TPM:1.54
655 A_BomoN4EE_TR100384_c1_g1_i1
307bp
 two-component_sensor_histidine_kinase_[Clostridium_kluyveri]
FPKM:0.49 TPM:0.66
656 A_BomoN4EE_TR100384_c2_g1_i1
400bp
FPKM:0.42 TPM:0.56
657 A_BomoN4EE_TR100385_c0_g1_i1
2812bp
 Leukocyte_receptor_cluster_member_1_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:0.91 TPM:1.22
658 A_BomoN4EE_TR100385_c0_g2_i1
2811bp
 Leukocyte_receptor_cluster_member_1_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:15.35 TPM:20.44
659 A_BomoN4EE_TR100386_c0_g1_i1
240bp
 NADH-ubiquinone_reductase_[Bombyx_mori]
FPKM:0.68 TPM:0.90
660 A_BomoN4EE_TR100386_c0_g1_i2
312bp
 NADH-ubiquinone_reductase_[Bombyx_mori]
FPKM:1.10 TPM:1.47
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