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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2401 A_BomoN4EE_TR101539_c0_g1_i1
278bp
 Phosphatidylinositol_3-_and_4-kinase_family_protein_[Coccidioides_posadasii_C735_delta_SOWgp]
FPKM:0.32 TPM:0.43
2402 A_BomoN4EE_TR10153_c0_g1_i1
339bp
FPKM:0.20 TPM:0.26
2403 A_BomoN4EE_TR101540_c0_g1_i1
428bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_28_homolog,_partial_[Papilio_machaon]
FPKM:2.22 TPM:2.95
2404 A_BomoN4EE_TR101541_c0_g1_i1
364bp
 hypothetical_protein_[Microvirga_lupini]
FPKM:0.51 TPM:0.67
2405 A_BomoN4EE_TR101542_c0_g1_i1
1831bp
 PREDICTED:_protein_SMG9_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
FPKM:19.24 TPM:25.63
2406 A_BomoN4EE_TR101543_c0_g1_i1
249bp
 nucleolar_GTP-binding_protein_2_(nucleomorph)_[Lotharella_vacuolata]
FPKM:1.33 TPM:1.77
2407 A_BomoN4EE_TR101544_c0_g1_i1
941bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.58 TPM:0.77
2408 A_BomoN4EE_TR101545_c0_g1_i1
608bp
 PREDICTED:_60S_ribosomal_protein_L44_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1603.15 TPM:2135.43
2409 A_BomoN4EE_TR101546_c0_g1_i1
1433bp
 putative_zinc_finger_protein_91-like_protein_[Operophtera_brumata]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0033674 P positive regulation of kinase activity
GO:0043066 P negative regulation of apoptotic process
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0072707 P cellular response to sodium dodecyl sulfate
GO:1901989 P positive regulation of cell cycle phase transition
FPKM:21.46 TPM:28.59
2410 A_BomoN4EE_TR101547_c0_g1_i1
510bp
 hypothetical_protein_[Methylomonas_methanica]
FPKM:0.55 TPM:0.73
2411 A_BomoN4EE_TR101548_c0_g1_i1
274bp
 hypothetical_protein_NL89_00865_[Bifidobacterium_longum_subsp._longum]
FPKM:0.67 TPM:0.89
2412 A_BomoN4EE_TR101549_c0_g1_i1
677bp
FPKM:0.36 TPM:0.48
2413 A_BomoN4EE_TR10154_c0_g1_i1
449bp
FPKM:0.11 TPM:0.15
2414 A_BomoN4EE_TR101550_c0_g1_i1
875bp
FPKM:20.23 TPM:26.95
2415 A_BomoN4EE_TR101551_c0_g1_i1
309bp
 hypothetical_protein_VITISV_026353_[Vitis_vinifera]
FPKM:0.97 TPM:1.30
2416 A_BomoN4EE_TR101552_c0_g1_i1
596bp
FPKM:0.36 TPM:0.48
2417 A_BomoN4EE_TR101553_c0_g1_i1
264bp
 Ccmar2_transposase_[Ceratitis_capitata]
FPKM:0.00 TPM:0.00
2418 A_BomoN4EE_TR101554_c0_g1_i1
1175bp
 PREDICTED:_thioredoxin-related_transmembrane_protein_1-like_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005730 C nucleolus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0015036 F disulfide oxidoreductase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:150.43 TPM:200.38
2419 A_BomoN4EE_TR101555_c0_g1_i1
480bp
 hypothetical_protein_SINV_11173,_partial_[Solenopsis_invicta]
FPKM:0.30 TPM:0.40
2420 A_BomoN4EE_TR101556_c0_g1_i1
281bp
FPKM:0.93 TPM:1.24
2421 A_BomoN4EE_TR101557_c0_g1_i1
264bp
FPKM:0.37 TPM:0.49
2422 A_BomoN4EE_TR101558_c0_g1_i1
307bp
 replication_factor_C_(activator_1)_5_[Bombyx_mori]
FPKM:4.70 TPM:6.26
2423 A_BomoN4EE_TR101559_c0_g1_i1
311bp
FPKM:0.72 TPM:0.96
2424 A_BomoN4EE_TR10155_c0_g1_i1
262bp
 olfactory_receptor_[Bombyx_mori]
FPKM:1.14 TPM:1.52
2425 A_BomoN4EE_TR101560_c0_g1_i1
242bp
FPKM:0.97 TPM:1.30
2426 A_BomoN4EE_TR101561_c0_g1_i1
278bp
FPKM:0.64 TPM:0.85
2427 A_BomoN4EE_TR101562_c0_g1_i1
263bp
FPKM:0.38 TPM:0.50
2428 A_BomoN4EE_TR101563_c0_g1_i1
233bp
FPKM:0.00 TPM:0.00
2429 A_BomoN4EE_TR101564_c0_g1_i1
277bp
FPKM:0.32 TPM:0.43
2430 A_BomoN4EE_TR101565_c0_g1_i1
309bp
FPKM:0.24 TPM:0.32
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