SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101544_c0_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.58 TPM:0.77
ORF EntryO_BomoN4EE51674_3prime_partial:A_BomoN4EE_TR101544_c0_g1_i1
Sequence
(Nucleotide)
ACTGGAAAGGTATGGTGACCGTTTCTCAAATAGATTGCATGATTTAGGGTTTACAACGAT
TACTGAGATGACCATAGAATTAATAGATGACGAACCTATTGTGTATCGCCCGTACCGTAT
GTCGTACGCCGAAAGACGATGGTGAGTAGCATGATCCAGGAAATGTTAGACAGCAATATA
ATAAAGGAGTCGTCATCACCCTATGCGAGTCCTATCATCATGGTGCAGAAGAAAACAGGT
GATAAACGCTTATGTGTCGACTACAGAGCTCTGAACAGAAAAACTAAAAAGGATCATTAC
CCGATGCCACGAGTGGAAGATCAGCTGGACTTGCTGGCGGGTAACACTTTATTTACTTCT
TTGGATTTGGCATCTGGCTACTATCAGATCCCCATATCGGAAGAGTCTCGACCCAAGACG
GCTTTCGTAACACCTGATGGTCAGTTTGAGTTTAACCGCATGCCTTTCGGTCTCGTTAAT
GCACCTTCAGTATTTCAAAGGACGATAAACAAAATATTGAAGGAAGCTAAAATTAAATAT
GCCATTGTATACATGGATGATATCCCTAATCCCGTCAAAAGACTTCGAGGAAGGATTGCT
GAGATTAGAGGAAGTACTCTACTGAAAGAAGGTGGGTTGACTTTAAAGTTAAGTAAGTGC
CATTTCTTCCTCGACACTGTAGACTTCCTCGGATTTGAAGTCAGCGCTGGTGGTATTCGA
CCTGGGAGTCGAAAAAGTGAAGCAGTCTCCAAGTTTCCACGACCCACGAATCAACACGAG
GTACGCCAATTTCTTGGACTGTCCGGTTTCTTTAGACGATTTATACAGGGATACGCCATC
ATCACTGCTCCCCTAACAGACTTATTAAAAAAGGATGCGGGATGGACCTGGAACGAGGAG
CAAGAACAAGCATTCGAAAGGATAAAGGAGTTACTTACAAG
(941 bp)

- SilkBase 1999-2023 -