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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2311 A_BomoN4EE_TR101462_c0_g1_i1
468bp
 PREDICTED:_thioredoxin_domain-containing_protein_5_[Bombyx_mori]
FPKM:0.53 TPM:0.70
2312 A_BomoN4EE_TR101463_c0_g1_i1
381bp
 olfactory_receptor_[Bombyx_mori]
FPKM:1.23 TPM:1.64
2313 A_BomoN4EE_TR101464_c0_g1_i1
447bp
FPKM:1.14 TPM:1.52
2314 A_BomoN4EE_TR101465_c0_g1_i1
3233bp
 PREDICTED:_sec1_family_domain-containing_protein_2-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
FPKM:51.06 TPM:68.01
2315 A_BomoN4EE_TR101466_c0_g1_i1
924bp
 Vascular_endothelial_growth_factor_receptor_1_[Dicentrarchus_labrax]
FPKM:0.24 TPM:0.32
2316 A_BomoN4EE_TR101467_c0_g1_i1
1020bp
FPKM:0.42 TPM:0.56
2317 A_BomoN4EE_TR101468_c0_g1_i1
1402bp
 PREDICTED:_myb-like_protein_X_isoform_X3_[Bombyx_mori]
FPKM:3.50 TPM:4.66
2318 A_BomoN4EE_TR101469_c0_g1_i1
373bp
FPKM:0.16 TPM:0.21
2319 A_BomoN4EE_TR10146_c0_g1_i1
385bp
FPKM:0.30 TPM:0.40
2320 A_BomoN4EE_TR101470_c0_g1_i1
875bp
 proteasome_subunit_alpha_type_6-A_[Bombyx_mori]
FPKM:1.62 TPM:2.15
2321 A_BomoN4EE_TR101471_c0_g1_i1
1688bp
 PREDICTED:_signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0007165 P signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0031901 C early endosome membrane
GO:0033565 C ESCRT-0 complex
GO:0036258 P multivesicular body assembly
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
FPKM:41.90 TPM:55.82
2322 A_BomoN4EE_TR101472_c0_g1_i1
1306bp
 PREDICTED:_uncharacterized_protein_LOC106124770_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
FPKM:16.72 TPM:22.27
2323 A_BomoN4EE_TR101473_c0_g1_i1
828bp
FPKM:0.46 TPM:0.61
2324 A_BomoN4EE_TR101474_c0_g1_i1
1546bp
 hypothetical_protein_KGM_11112_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
FPKM:30.21 TPM:40.24
2325 A_BomoN4EE_TR101475_c0_g1_i1
1912bp
 PREDICTED:_retinal_dehydrogenase_1-like_[Amyelois_transitella]
GO:0001758 F retinal dehydrogenase activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0055114 P obsolete oxidation-reduction process
FPKM:51.08 TPM:68.04
2326 A_BomoN4EE_TR101476_c0_g1_i1
347bp
 PREDICTED:_uncharacterized_protein_LOC106708887_[Papilio_machaon]
FPKM:6.15 TPM:8.19
2327 A_BomoN4EE_TR101477_c0_g1_i1
879bp
 Sugar_transporter_[Operophtera_brumata]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:0.68 TPM:0.90
2328 A_BomoN4EE_TR101478_c0_g1_i1
954bp
 PREDICTED:_NADH_dehydrogenase_[ubiquinone]_iron-sulfur_protein_4,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0007420 P brain development
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0019933 P cAMP-mediated signaling
GO:0022900 P electron transport chain
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0045333 P cellular respiration
GO:0048146 P positive regulation of fibroblast proliferation
GO:0051591 P response to cAMP
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0072593 P reactive oxygen species metabolic process
FPKM:85.82 TPM:114.31
2329 A_BomoN4EE_TR101479_c0_g1_i1
263bp
FPKM:0.38 TPM:0.50
2330 A_BomoN4EE_TR10147_c0_g1_i1
640bp
FPKM:0.58 TPM:0.78
2331 A_BomoN4EE_TR101480_c0_g1_i1
1476bp
 PREDICTED:_bifunctional_arginine_demethylase_and_lysyl-hydroxylase_PSR_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0018395 P peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
GO:0035212 P cell competition in a multicellular organism
GO:0043066 P negative regulation of apoptotic process
GO:0046329 P negative regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070815 F peptidyl-lysine 5-dioxygenase activity
FPKM:35.93 TPM:47.86
2332 A_BomoN4EE_TR101481_c0_g1_i1
293bp
FPKM:0.28 TPM:0.37
2333 A_BomoN4EE_TR101482_c0_g1_i1
2130bp
 PREDICTED:_conserved_oligomeric_Golgi_complex_subunit_6_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0019233 P sensory perception of pain
FPKM:25.46 TPM:33.91
2334 A_BomoN4EE_TR101483_c0_g1_i1
2908bp
 chaperonin_subunit_4_delta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
FPKM:193.90 TPM:258.27
2335 A_BomoN4EE_TR101484_c0_g1_i1
330bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:18.33 TPM:24.42
2336 A_BomoN4EE_TR101485_c0_g1_i1
4446bp
 PREDICTED:_intron-binding_protein_aquarius_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
FPKM:23.80 TPM:31.70
2337 A_BomoN4EE_TR101486_c0_g1_i1
579bp
 hypothetical_protein_KGM_05403_[Danaus_plexippus]
FPKM:3.53 TPM:4.70
2338 A_BomoN4EE_TR101486_c0_g2_i1
482bp
 hypothetical_protein_KGM_05403_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
2339 A_BomoN4EE_TR101487_c0_g1_i1
1034bp
 uncharacterized_protein_LOC101738082_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
FPKM:0.28 TPM:0.37
2340 A_BomoN4EE_TR101488_c0_g1_i1
1028bp
 PREDICTED:_DNA_cytosine-5_methyltransferase_isoform_X1_[Bombyx_mori]
FPKM:1.35 TPM:1.80
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